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MIR4435-2HG MIR4435-2 host gene [ Homo sapiens (human) ]

Gene ID: 541471, updated on 28-Nov-2021

Summary

Official Symbol
MIR4435-2HGprovided by HGNC
Official Full Name
MIR4435-2 host geneprovided by HGNC
Primary source
HGNC:HGNC:35163
See related
Ensembl:ENSG00000172965 MIM:617144
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AGD2; MORRBID; LINC00978; MIR4435-1HG; lncRNA-AWPPH
Expression
Ubiquitous expression in appendix (RPKM 2.9), placenta (RPKM 2.8) and 24 other tissues See more
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Genomic context

See MIR4435-2HG in Genome Data Viewer
Location:
2q13
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (111195866..111495161, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (111953443..112252738, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase like Neighboring gene Sharpr-MPRA regulatory region 8028 Neighboring gene ACOXL antisense RNA 1 Neighboring gene BCL2 like 11 Neighboring gene Sharpr-MPRA regulatory region 6991 Neighboring gene uncharacterized LOC101927283 Neighboring gene ribosomal protein S14 pseudogene 4 Neighboring gene microRNA 4435-2 Neighboring gene platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2 Neighboring gene serous ovarian cancer associated RNA Neighboring gene uncharacterized LOC105373559 Neighboring gene uncharacterized LOC107985933 Neighboring gene DBF4 zinc finger pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • MIR4435-1 host gene (non-protein coding)
  • adipogenesis down-regulated transcript 2
  • lncRNA associated with poor prognosis of HCC
  • long intergenic non-protein coding RNA 978
  • myeloid RNA regulator of Bim-induced death

Clone Names

  • FLJ10934, AC068491.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015395.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017002, AC068491, AC108463
    Related
    ENST00000666144.1
  2. NR_024373.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 3' end and is much shorter than variant 1.
    Source sequence(s)
    BC014776, DA316588
    Related
    ENST00000409569.2
  3. NR_136161.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108463, BQ026171, BX647931, DA316588
    Related
    ENST00000439362.6
  4. NR_136162.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017002, AC068491, AC096670, AC108463
    Related
    ENST00000667670.1
  5. NR_136163.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017002, AC068491, AC096670, AC108463
    Related
    ENST00000661559.1
  6. NR_136164.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017002, AC068491, AC096670, AC108463
  7. NR_136165.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AB485977, AC108463, DA316588
    Related
    ENST00000659458.1
  8. NR_136166.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC017002, AC068491, AC108463
    Related
    ENST00000659933.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    111195866..111495161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013744.1: Suppressed sequence

    Description
    NM_001013744.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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