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LINC00308 long intergenic non-protein coding RNA 308 [ Homo sapiens (human) ]

Gene ID: 54143, updated on 1-Jun-2020

Summary

Official Symbol
LINC00308provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 308provided by HGNC
Primary source
HGNC:HGNC:16023
See related
Ensembl:ENSG00000184856
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRED16; C21orf74; NCRNA00308
Expression
Low expression observed in reference dataset See more

Genomic context

See LINC00308 in Genome Data Viewer
Location:
21q21.1
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (22098617..22116528)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (23470936..23488847)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1425 Neighboring gene long intergenic non-protein coding RNA 1687 Neighboring gene phosphoglycerate kinase 1 pseudogene Neighboring gene uncharacterized LOC107985508 Neighboring gene RNA, U4 small nuclear 45, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038400.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP000705, AY077696
    Related
    ENST00000419431.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    22098617..22116528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NW_003315968.2 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    6963..14055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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