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AFF4 ALF transcription elongation factor 4 [ Bos taurus (domestic cattle) ]

Gene ID: 541306, updated on 30-Jan-2025
Official Symbol
AFF4provided by VGNC
Official Full Name
ALF transcription elongation factor 4provided by VGNC
Primary source
VGNC:VGNC:25712
See related
BGD:BT13233; EnsemblRapid:ENSBTAG00070005835
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
Try the new Gene page
Try the new Transcripts and proteins table
See AFF4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (44455511..44540451, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene ubiquinol-cytochrome c reductase complex III subunit VII Neighboring gene liver enriched antimicrobial peptide 2 Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger CCHC-type containing 10

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly
  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of super elongation complex IEA
Inferred from Electronic Annotation
more info
PubMed 
Preferred Names
AF4/FMR2 family member 4

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191129.1NP_001178058.1  AF4/FMR2 family member 4

    See identical proteins and their annotated locations for NP_001178058.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000007
    UniProtKB/TrEMBL
    A0AAA9SZI0, E1BCF6
    Related
    ENSBTAP00070007696.1, ENSBTAT00070013359.1
    Conserved Domains (1) summary
    pfam05110
    Location:31160
    AF-4; AF-4 proto-oncoprotein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44455511..44540451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010807254.4XP_010805556.1  AF4/FMR2 family member 4 isoform X2

    See identical proteins and their annotated locations for XP_010805556.1

    UniProtKB/TrEMBL
    A0AAA9SZI0, A0AAA9TGC5
    Related
    ENSBTAP00070007697.1, ENSBTAT00070013360.1
    Conserved Domains (1) summary
    pfam05110
    Location:31131
    AF-4; AF-4 proto-oncoprotein
  2. XM_005209304.5XP_005209361.1  AF4/FMR2 family member 4 isoform X1

    See identical proteins and their annotated locations for XP_005209361.1

    UniProtKB/TrEMBL
    A0AAA9SZI0, E1BCF6
    Conserved Domains (1) summary
    pfam05110
    Location:31160
    AF-4; AF-4 proto-oncoprotein