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ELOC elongin C [ Bos taurus (domestic cattle) ]

Gene ID: 540859, updated on 17-Aug-2024

Summary

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Official Symbol
ELOCprovided by VGNC
Official Full Name
elongin Cprovided by VGNC
Primary source
VGNC:VGNC:28445
See related
BGD:BT26177; Ensembl:ENSBTAG00000050514
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TCEB1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (37196547..37220227, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene staufen double-stranded RNA binding protein 2 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene ubiquitin conjugating enzyme E2 W Neighboring gene transmembrane protein 70 Neighboring gene lymphocyte antigen 96 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC137138

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongin-C
Names
RNA polymerase II transcription factor SIII subunit C
SIII p15
elongin 15 kDa subunit
transcription elongation factor B polypeptide 1
transcription elongation factor B subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046493.2 → NP_001039958.1  elongin-C

    See identical proteins and their annotated locations for NP_001039958.1

    Status: VALIDATED

    Source sequence(s)
    BC112626, DAAA02038848
    UniProtKB/Swiss-Prot
    Q2KII4
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  2. NM_001359989.1 → NP_001346918.1  elongin-C

    Status: VALIDATED

    Source sequence(s)
    BC112626, DAAA02038848, EE218883
    UniProtKB/Swiss-Prot
    Q2KII4
    Related
    ENSBTAP00000065112.1, ENSBTAT00000078734.1
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    37196547..37220227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005215528.5 → XP_005215585.1  elongin-C isoform X1

    See identical proteins and their annotated locations for XP_005215585.1

    UniProtKB/Swiss-Prot
    Q2KII4
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  2. XM_059893332.1 → XP_059749315.1  elongin-C isoform X1

    UniProtKB/Swiss-Prot
    Q2KII4
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KII4.1 GenPept UniProtKB/Swiss-Prot:Q2KII4

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