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B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [ Bos taurus (domestic cattle) ]

Gene ID: 540848, updated on 5-Sep-2025
Official Symbol
B3GNT6provided by VGNC
Official Full Name
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6provided by VGNC
Primary source
VGNC:VGNC:26382
See related
BGD:BT21586; EnsemblRapid:ENSBTAG00070028631
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Annotation information
Note: GeneIDs: 540848 and 786615 are annotated independently on Btau_4.6.1, but may be redundant loci. [17 Jun 2014]
Orthologs
human mouse all
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See B3GNT6 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (56447330..56459227)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene bcl-2-like protein 1 Neighboring gene uncharacterized LOC132342348 Neighboring gene calpain 5 Neighboring gene olfactory marker protein Neighboring gene myosin VIIA Neighboring gene glycerophosphodiester phosphodiesterase domain-containing protein 4

Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Clone Names

  • MGC139087

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase
Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
NP_001096777.1
XP_024831274.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103307.1 → NP_001096777.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for NP_001096777.1

    Status: PROVISIONAL

    Source sequence(s)
    BC140496
    UniProtKB/TrEMBL
    A0AAA9S2C3, A5D7B6
    Related
    ENSBTAP00070039232.1, ENSBTAT00070065091.1
    Conserved Domains (1) summary
    cl21608
    Location:126 → 318
    Galactosyl_T; Galactosyltransferase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    56447330..56459227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024975506.2 → XP_024831274.1  acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    A0AAA9S2C3, F1MGN7
    Related
    ENSBTAP00070039237.1, ENSBTAT00070065101.1
    Conserved Domains (1) summary
    cl21608
    Location:129 → 321
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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