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SMIM11 small integral membrane protein 11 [ Homo sapiens (human) ]

Gene ID: 54065, updated on 3-May-2025
Official Symbol
SMIM11provided by HGNC
Official Full Name
small integral membrane protein 11provided by HGNC
Primary source
HGNC:HGNC:1293
See related
Ensembl:ENSG00000205670 AllianceGenome:HGNC:1293
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM165B; SMIM11A; SMIM11B; C21orf51
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, May 2025]
Expression
Ubiquitous expression in brain (RPKM 5.9), thyroid (RPKM 5.4) and 25 other tissues See more
Orthologs
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See SMIM11 in Genome Data Viewer
Location:
21q22.11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (34375507..34389151)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (32757557..32771207)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (35747806..35761449)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 310 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18394 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:35575958-35576956 Neighboring gene VISTA enhancer hs2174 Neighboring gene uncharacterized LOC105372791 Neighboring gene Sharpr-MPRA regulatory region 13847 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:35755873-35756380 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:35756381-35756886 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:35756972-35757494 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:35757495-35758015 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 2 Neighboring gene salivary glue protein Sgs-3 Neighboring gene chromosome 21 open reading frame 140 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr21:35788990-35790189 Neighboring gene small integral membrane protein 34

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018
Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
small integral membrane protein 11
Names
family with sequence similarity 165, member B
protein FAM165B
small integral membrane protein 11A

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001376899.1NP_001363828.1  small integral membrane protein 11

    Status: VALIDATED

    Source sequence(s)
    AP000320, AP000321
    Consensus CDS
    CCDS33550.1
    UniProtKB/Swiss-Prot
    P58511
    Related
    ENSP00000382234.2, ENST00000399295.2
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family
  2. NM_058182.5NP_478062.1  small integral membrane protein 11

    See identical proteins and their annotated locations for NP_478062.1

    Status: VALIDATED

    Source sequence(s)
    AP000320, AP000321
    Consensus CDS
    CCDS33550.1
    UniProtKB/Swiss-Prot
    P58511
    Related
    ENSP00000382231.4, ENST00000399292.8
    Conserved Domains (1) summary
    pfam14981
    Location:453
    FAM165; FAM165 family

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    34375507..34389151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    32757557..32771207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)