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HSPA1L heat shock 70kDa protein 1-like [ Bos taurus (domestic cattle) ]

Gene ID: 540190, updated on 30-Jan-2025
Gene symbol
HSPA1L
Gene description
heat shock 70kDa protein 1-like
See related
BGD:BT12198; EnsemblRapid:ENSBTAG00070014427
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See HSPA1L in Genome Data Viewer
Location:
chromosome: 23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27522845..27527209)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim17-B-like Neighboring gene small nucleolar RNA SNORD48 Neighboring gene heat shock protein family A (Hsp70) member 1A Neighboring gene LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene valyl-tRNA synthetase 1 Neighboring gene von Willebrand factor A domain containing 7 Neighboring gene suppressor APC domain containing 1

Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Bovine Genome Sequencing and Analysis Consortium, et al. Science, 2009 Apr 24. PMID 19390049, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
heat shock 70 kDa protein 1-like
Names
Heat shock 70 kDa protein 1L

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167895.1 → NP_001161367.1  heat shock 70 kDa protein 1-like

    See identical proteins and their annotated locations for NP_001161367.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000023
    UniProtKB/Swiss-Prot
    P0CB32
    UniProtKB/TrEMBL
    A0AAF6ZC94
    Related
    ENSBTAP00070019125.1, ENSBTAT00070032604.1
    Conserved Domains (2) summary
    cd10233
    Location:8 → 383
    HSPA1-2_6-8-like_NBD; Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins
    PTZ00009
    Location:3 → 641
    PTZ00009; heat shock 70 kDa protein; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27522845..27527209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005223678.5 → XP_005223735.1  heat shock 70 kDa protein 1-like isoform X1

    See identical proteins and their annotated locations for XP_005223735.1

    UniProtKB/Swiss-Prot
    P0CB32
    UniProtKB/TrEMBL
    A0AAF6ZC94
    Related
    ENSBTAP00070019128.1, ENSBTAT00070032609.1
    Conserved Domains (2) summary
    cd10233
    Location:8 → 383
    HSPA1-2_6-8-like_NBD; Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins
    PTZ00009
    Location:3 → 641
    PTZ00009; heat shock 70 kDa protein; Provisional
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CB32.1 GenPept UniProtKB/Swiss-Prot:P0CB32

Gene LinkOut

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