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APOF apolipoprotein F [ Bos taurus (domestic cattle) ]

Gene ID: 539595, updated on 5-Sep-2025
Official Symbol
APOFprovided by VGNC
Official Full Name
apolipoprotein Fprovided by VGNC
Primary source
VGNC:VGNC:55845
See related
BGD:BT15244; EnsemblRapid:ENSBTAG00070012115
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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See APOF in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (56979557..56994574)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 4 Neighboring gene major intrinsic protein of lens fiber Neighboring gene timeless circadian regulator Neighboring gene apolipoprotein N Neighboring gene signal transducer and activator of transcription 2 Neighboring gene interleukin 23 subunit alpha Neighboring gene microRNA mir-2432

Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly
  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 
Preferred Names
apolipoprotein F

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001128502.2NP_001121974.1  apolipoprotein F precursor

    See identical proteins and their annotated locations for NP_001121974.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118363
    UniProtKB/TrEMBL
    F1MSN1, Q17QH1
    Related
    ENSBTAP00070016401.1, ENSBTAT00070027390.1
    Conserved Domains (1) summary
    pfam15148
    Location:45242
    Apolipo_F; Apolipoprotein F

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    56979557..56994574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015471122.3XP_015326608.1  apolipoprotein F isoform X2

    UniProtKB/TrEMBL
    F1MSN1, Q17QH1
    Related
    ENSBTAP00070016385.1, ENSBTAT00070027374.1
    Conserved Domains (1) summary
    pfam15148
    Location:45242
    Apolipo_F; Apolipoprotein F
  2. XM_005206659.5XP_005206716.1  apolipoprotein F isoform X1

    Related
    ENSBTAP00070016391.1, ENSBTAT00070027380.1
    Conserved Domains (1) summary
    pfam15148
    Location:86283
    Apolipo_F; Apolipoprotein F