U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Bos taurus (domestic cattle) ]

Gene ID: 539417, updated on 5-Sep-2025
Official Symbol
C1GALT1provided by VGNC
Official Full Name
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:26615
See related
BGD:BT13509; EnsemblRapid:ENSBTAG00070001367
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See C1GALT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (15276517..15320913)

Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene tachykinin precursor 1 Neighboring gene asparagine synthetase (glutamine-hydrolyzing) Neighboring gene collagen type XXVIII alpha 1 chain Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene pancreatic progenitor cell differentiation and proliferation factor-like Neighboring gene meiosis regulator for oocyte development

Genomic Sequence:
NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC142672

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Names
core 1 O-glycan T-synthase
core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1
core 1 beta1,3-galactosyltransferase 1
core 1 beta3-Gal-T
core 1 beta3-Gal-T1
core1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1
NP_001069628.1
XP_015323635.1
XP_024846596.1
XP_024846598.1

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076160.2 → NP_001069628.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

    See identical proteins and their annotated locations for NP_001069628.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120299
    UniProtKB/Swiss-Prot
    Q0VC84
    UniProtKB/TrEMBL
    A0AAA9T596
    Related
    ENSBTAP00070001896.1, ENSBTAT00070003181.1
    Conserved Domains (1) summary
    cl21608
    Location:107 → 248
    Galactosyl_T; Galactosyltransferase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    15276517..15320913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024990830.2 → XP_024846598.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

  2. XM_024990828.2 → XP_024846596.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    UniProtKB/Swiss-Prot
    Q0VC84
    UniProtKB/TrEMBL
    A0AAA9T596
    Related
    ENSBTAP00070001889.1, ENSBTAT00070003169.1
    Conserved Domains (1) summary
    cl21608
    Location:107 → 248
    Galactosyl_T; Galactosyltransferase

  3. XM_015468149.3 → XP_015323635.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0AAA9T596, A0AAF7A9X6
    Related
    ENSBTAP00070001893.1, ENSBTAT00070003177.1
    Conserved Domains (1) summary
    cl21608
    Location:114 → 255
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0VC84.1 GenPept UniProtKB/Swiss-Prot:Q0VC84

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.