CALU calumenin [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: CALUprovided by VGNC
Official Full Name: calumeninprovided by VGNC
Primary source: VGNC:VGNC:26717
See related: BGD:BT22775; EnsemblRapid:ENSBTAG00070024239
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	4	NC_037331.1 (92720031..92744872)

Chromosome 4 - NC_037331.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

Calu (e-PCR), detects polymorphism
- UniSTS:464721

Calu (e-PCR), detects polymorphism
- UniSTS:464722

MARC_11525-11526:1001518036:1 (e-PCR)
- UniSTS:267216

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: calumenin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001034665.2 → NP_001029837.1 calumenin precursor

See identical proteins and their annotated locations for NP_001029837.1

Status: PROVISIONAL

Source sequence(s)

BC102361

UniProtKB/Swiss-Prot

Q3T0K1

UniProtKB/TrEMBL

A0A3Q1NC75

Related

ENSBTAP00070032756.1, ENSBTAT00070054710.1

Conserved Domains (2) summary

pfam13499
Location:157 → 214

EF-hand_7; EF-hand domain pair

cl08302
Location:157 → 214

EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...