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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Bos taurus (domestic cattle) ]

Gene ID: 537595, updated on 30-Jan-2025
Official Symbol
MGAT5provided by VGNC
Official Full Name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:54620
See related
BGD:BT28871; EnsemblRapid:ENSBTAG00070000855
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Location:
chromosome: 2
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (62783150..63181419, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene transmembrane protein 163 Neighboring gene U6 spliceosomal RNA Neighboring gene U6atac minor spliceosomal RNA

Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
NP_001178271.1
XP_005202593.1
XP_005202594.1
XP_024832179.1
XP_059731731.1
XP_059731732.1
XP_059731734.1
XP_059731737.1
XP_059731740.1
XP_059731742.1
XP_059731745.1
XP_059731754.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191342.1 → NP_001178271.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    See identical proteins and their annotated locations for NP_001178271.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000002
    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2
    Related
    ENSBTAP00070001046.1, ENSBTAT00070001965.1
    Conserved Domains (2) summary
    pfam15024
    Location:170 → 724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 134
    DUF4525; Domain of unknown function (DUF4525)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    62783150..63181419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875762.1 → XP_059731745.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  2. XM_059875759.1 → XP_059731742.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  3. XM_005202537.5 → XP_005202594.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    See identical proteins and their annotated locations for XP_005202594.1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2
    Conserved Domains (2) summary
    pfam15024
    Location:170 → 724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 134
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_024976411.2 → XP_024832179.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X2

    UniProtKB/TrEMBL
    A0A3Q1N3F8, E1BMM2
    Related
    ENSBTAP00070001050.1, ENSBTAT00070001969.1
    Conserved Domains (2) summary
    pfam15024
    Location:159 → 694
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 134
    DUF4525; Domain of unknown function (DUF4525)

  5. XM_005202536.5 → XP_005202593.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    See identical proteins and their annotated locations for XP_005202593.1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2
    Conserved Domains (2) summary
    pfam15024
    Location:170 → 724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 134
    DUF4525; Domain of unknown function (DUF4525)

  6. XM_059875751.1 → XP_059731734.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  7. XM_059875749.1 → XP_059731732.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  8. XM_059875757.1 → XP_059731740.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  9. XM_059875748.1 → XP_059731731.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  10. XM_059875754.1 → XP_059731737.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCW8, E1BMM2

  11. XM_059875771.1 → XP_059731754.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X3

    UniProtKB/TrEMBL
    E1BMM2
Nucleotide Protein Strain
Heading Accession and Version

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