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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Bos taurus (cattle) ]

Gene ID: 537595, updated on 4-Jul-2020

Summary

Official Symbol
MGAT5provided by VGNC
Official Full Name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:54620
See related
BGD:BT28871; Ensembl:ENSBTAG00000018744
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See MGAT5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 2 NC_037329.1 (62783150..63181426, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 2 AC_000159.1 (63113205..63511913, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene transmembrane protein 163 Neighboring gene U6 spliceosomal RNA Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
NP_001178271.1
XP_005202593.1
XP_005202594.1
XP_024832170.1
XP_024832176.1
XP_024832179.1
XP_024832188.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191342.1NP_001178271.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    See identical proteins and their annotated locations for NP_001178271.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000002
    UniProtKB/TrEMBL
    E1BMM2
    Related
    ENSBTAP00000053618.2, ENSBTAT00000061333.3
    Conserved Domains (2) summary
    pfam15024
    Location:170724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    62783150..63181426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005202537.4XP_005202594.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    See identical proteins and their annotated locations for XP_005202594.1

    UniProtKB/TrEMBL
    E1BMM2
    Conserved Domains (2) summary
    pfam15024
    Location:170724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)
  2. XM_005202536.4XP_005202593.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    See identical proteins and their annotated locations for XP_005202593.1

    UniProtKB/TrEMBL
    E1BMM2
    Related
    ENSBTAP00000066651.1, ENSBTAT00000084741.1
    Conserved Domains (2) summary
    pfam15024
    Location:170724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)
  3. XM_024976411.1XP_024832179.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X2

    Related
    ENSBTAP00000071133.1, ENSBTAT00000085485.1
    Conserved Domains (2) summary
    pfam15024
    Location:159694
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)
  4. XM_024976408.1XP_024832176.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    Conserved Domains (2) summary
    pfam15024
    Location:170724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)
  5. XM_024976402.1XP_024832170.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    Conserved Domains (2) summary
    pfam15024
    Location:170724
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7134
    DUF4525; Domain of unknown function (DUF4525)
  6. XM_024976420.1XP_024832188.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X3

    Conserved Domains (2) summary
    pfam15024
    Location:110664
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:2274
    DUF4525; Domain of unknown function (DUF4525)
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