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Anae109_0939 DNA ligase D [ Anaeromyxobacter sp. Fw109-5 ]

Gene ID: 5373860, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
Anae109_0939
Gene description
DNA ligase D
Locus tag
Anae109_0939
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Anaeromyxobacter sp. Fw109-5 (strain: Fw109-5)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA ligase D
YP_001378132.1
  • TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region
    PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase
    KEGG: pcu:pc1833 hypothetical protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009675.1 Reference assembly

    Range
    1065326..1067869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001378132.1 DNA ligase D [Anaeromyxobacter sp. Fw109-5]

    Status: PROVISIONAL

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