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ABCA6 ATP binding cassette subfamily A member 6 [ Bos taurus (cattle) ]

Gene ID: 537351, updated on 3-Apr-2024

Summary

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Official Symbol
ABCA6provided by VGNC
Official Full Name
ATP binding cassette subfamily A member 6provided by VGNC
Primary source
VGNC:VGNC:25460
See related
BGD:BT30269; Ensembl:ENSBTAG00000006921
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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Location:
chromosome: 19
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (61420312..61483298)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 2-like Neighboring gene ATP binding cassette subfamily A member 5 Neighboring gene ATP binding cassette subfamily A member 10 Neighboring gene uncharacterized LOC132342980 Neighboring gene ATP binding cassette subfamily A member 9 Neighboring gene uncharacterized LOC107131548

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family A member 6
Names
ATP-binding cassette, sub-family A (ABC1), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    61420312..61483298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059878359.1 → XP_059734342.1  ATP-binding cassette sub-family A member 6 isoform X1

  2. XM_024981107.2 → XP_024836875.1  ATP-binding cassette sub-family A member 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M774
    Related
    ENSBTAP00000009089.7, ENSBTAT00000009089.7
    Conserved Domains (1) summary
    cl28181
    Location:170 → 1601
    AAA; ATPases associated with a variety of cellular activities

  3. XM_059878360.1 → XP_059734343.1  ATP-binding cassette sub-family A member 6 isoform X2

  4. XM_059878361.1 → XP_059734344.1  ATP-binding cassette sub-family A member 6 isoform X3

  5. XM_059878362.1 → XP_059734345.1  ATP-binding cassette sub-family A member 6 isoform X4

  6. XM_024981111.2 → XP_024836879.1  ATP-binding cassette sub-family A member 6 isoform X5

    UniProtKB/TrEMBL
    A0A3Q1M774
    Conserved Domains (1) summary
    cl28181
    Location:15 → 1283
    AAA; ATPases associated with a variety of cellular activities
Nucleotide Protein Strain
Heading Accession and Version

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