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TEAD1 TEA domain transcription factor 1 [ Bos taurus (cattle) ]

Gene ID: 536560, updated on 3-Apr-2024

Summary

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Official Symbol
TEAD1provided by VGNC
Official Full Name
TEA domain transcription factor 1provided by VGNC
Primary source
VGNC:VGNC:35724
See related
BGD:BT13888; Ensembl:ENSBTAG00000032657
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (39740865..40015346, complement)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene Ras association domain family member 10 Neighboring gene microRNA mir-2314 Neighboring gene parvin alpha Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC132342329 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional enhancer factor TEF-1
Names
TEA domain family member 1 (SV40 transcriptional enhancer factor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    39740865..40015346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875101.1 → XP_059731084.1  transcriptional enhancer factor TEF-1 isoform X6

  2. XM_024975801.2 → XP_024831569.1  transcriptional enhancer factor TEF-1 isoform X4

    Related
    ENSBTAP00000061797.2, ENSBTAT00000084480.2
    Conserved Domains (1) summary
    smart00426
    Location:227 → 294
    TEA; TEA domain

  3. XM_024975798.2 → XP_024831566.1  transcriptional enhancer factor TEF-1 isoform X3

    Conserved Domains (1) summary
    smart00426
    Location:227 → 294
    TEA; TEA domain

  4. XM_024975800.2 → XP_024831568.1  transcriptional enhancer factor TEF-1 isoform X5

    Related
    ENSBTAP00000070217.2, ENSBTAT00000077322.2
    Conserved Domains (1) summary
    smart00426
    Location:227 → 294
    TEA; TEA domain

  5. XM_024975797.1 → XP_024831565.1  transcriptional enhancer factor TEF-1 isoform X2

    Related
    ENSBTAP00000062664.2, ENSBTAT00000079873.2
    Conserved Domains (1) summary
    smart00426
    Location:227 → 294
    TEA; TEA domain

  6. XM_002693050.6 → XP_002693096.4  transcriptional enhancer factor TEF-1 isoform X1

    Conserved Domains (1) summary
    smart00426
    Location:227 → 294
    TEA; TEA domain

  7. XM_010812533.4 → XP_010810835.1  transcriptional enhancer factor TEF-1 isoform X8

    See identical proteins and their annotated locations for XP_010810835.1

    UniProtKB/TrEMBL
    A0A3Q1LKE4, A0A3Q1M3C1
    Related
    ENSBTAP00000057095.2, ENSBTAT00000084467.2
    Conserved Domains (2) summary
    smart00426
    Location:15 → 82
    TEA; TEA domain
    pfam17725
    Location:225 → 433
    YBD; YAP binding domain

  8. XM_059875102.1 → XP_059731085.1  transcriptional enhancer factor TEF-1 isoform X8

    UniProtKB/TrEMBL
    A0A3Q1M3C1
    Related
    ENSBTAP00000072694.2, ENSBTAT00000080640.2

  9. XM_024975802.2 → XP_024831570.1  transcriptional enhancer factor TEF-1 isoform X8

    UniProtKB/TrEMBL
    A0A3Q1LKE4, A0A3Q1M3C1
    Conserved Domains (2) summary
    smart00426
    Location:15 → 82
    TEA; TEA domain
    pfam17725
    Location:225 → 433
    YBD; YAP binding domain

  10. XM_005216088.5 → XP_005216145.1  transcriptional enhancer factor TEF-1 isoform X8

    See identical proteins and their annotated locations for XP_005216145.1

    UniProtKB/TrEMBL
    A0A3Q1LKE4, A0A3Q1M3C1
    Related
    ENSBTAP00000090260.1, ENSBTAT00000097296.1
    Conserved Domains (2) summary
    smart00426
    Location:15 → 82
    TEA; TEA domain
    pfam17725
    Location:225 → 433
    YBD; YAP binding domain

  11. XM_005216086.5 → XP_005216143.1  transcriptional enhancer factor TEF-1 isoform X7

    See identical proteins and their annotated locations for XP_005216143.1

    UniProtKB/TrEMBL
    A0A3Q1LKE4, A0A3Q1N1G2
    Related
    ENSBTAP00000062884.2, ENSBTAT00000067627.2
    Conserved Domains (2) summary
    smart00426
    Location:53 → 120
    TEA; TEA domain
    pfam17725
    Location:263 → 471
    YBD; YAP binding domain

  12. XM_015474694.3 → XP_015330180.1  transcriptional enhancer factor TEF-1 isoform X8

    UniProtKB/TrEMBL
    A0A3Q1LKE4, A0A3Q1M3C1
    Conserved Domains (2) summary
    smart00426
    Location:15 → 82
    TEA; TEA domain
    pfam17725
    Location:225 → 433
    YBD; YAP binding domain
Nucleotide Protein Strain
Heading Accession and Version

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