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EFEMP2 EGF containing fibulin extracellular matrix protein 2 [ Bos taurus (cattle) ]

Gene ID: 535222, updated on 5-Mar-2024

Summary

Official Symbol
EFEMP2provided by VGNC
Official Full Name
EGF containing fibulin extracellular matrix protein 2provided by VGNC
Primary source
VGNC:VGNC:28349
See related
BGD:BT10233; Ensembl:ENSBTAG00000021457
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See EFEMP2 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (43984835..43992177, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344224 Neighboring gene cofilin 1 Neighboring gene MUS81 structure-specific endonuclease subunit Neighboring gene FGF1 intracellular binding protein Neighboring gene cathepsin W Neighboring gene coiled-coil domain containing 85B

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

General protein information

Preferred Names
EGF-containing fibulin-like extracellular matrix protein 2
Names
EGF containing fibulin like extracellular matrix protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076049.1NP_001069517.1  EGF-containing fibulin-like extracellular matrix protein 2 precursor

    See identical proteins and their annotated locations for NP_001069517.1

    Status: PROVISIONAL

    Source sequence(s)
    BC122660
    UniProtKB/TrEMBL
    F1MUS7, Q0IIG2
    Related
    ENSBTAP00000028604.6, ENSBTAT00000028604.7
    Conserved Domains (3) summary
    smart00179
    Location:123163
    EGF_CA; Calcium-binding EGF-like domain
    cl00057
    Location:198238
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl21504
    Location:283310
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    43984835..43992177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010821107.3XP_010819409.1  EGF-containing fibulin-like extracellular matrix protein 2 isoform X1

    See identical proteins and their annotated locations for XP_010819409.1

    UniProtKB/TrEMBL
    F1MUS7, Q0IIG2
    Conserved Domains (3) summary
    smart00179
    Location:123163
    EGF_CA; Calcium-binding EGF-like domain
    cl00057
    Location:198238
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl21504
    Location:283310
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
  2. XM_010821106.3XP_010819408.1  EGF-containing fibulin-like extracellular matrix protein 2 isoform X1

    See identical proteins and their annotated locations for XP_010819408.1

    UniProtKB/TrEMBL
    F1MUS7, Q0IIG2
    Conserved Domains (3) summary
    smart00179
    Location:123163
    EGF_CA; Calcium-binding EGF-like domain
    cl00057
    Location:198238
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl21504
    Location:283310
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...