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TES testin LIM domain protein [ Bos taurus (domestic cattle) ]

Gene ID: 534965, updated on 18-Aug-2024

Summary

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Official Symbol
TESprovided by VGNC
Official Full Name
testin LIM domain proteinprovided by VGNC
Primary source
VGNC:VGNC:35752
See related
BGD:BT19960; Ensembl:ENSBTAG00000021204
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (52168927..52224938, complement)

Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene mitochondrial carrier homolog 2-like Neighboring gene caveolin 2 Neighboring gene transcription factor EC Neighboring gene MyoD family inhibitor domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC134324

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
testin
Names
testis derived transcript (3 LIM domains)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046390.2 → NP_001039855.1  testin

    See identical proteins and their annotated locations for NP_001039855.1

    Status: PROVISIONAL

    Source sequence(s)
    BC110254
    UniProtKB/Swiss-Prot
    A4D7R3, Q2YDE9
    Related
    ENSBTAP00000031665.4, ENSBTAT00000031716.6
    Conserved Domains (4) summary
    cd09413
    Location:236 → 293
    LIM1_Testin; The first LIM domain of Testin
    cd09416
    Location:299 → 354
    LIM2_Testin; The second LIM domain of Testin
    cd09419
    Location:361 → 419
    LIM3_Testin; The third LIM domain of Testin
    cd09829
    Location:109 → 195
    PET_testin; The PET domain of Testin

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    52168927..52224938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005205432.5 → XP_005205489.1  testin isoform X1

    See identical proteins and their annotated locations for XP_005205489.1

    Conserved Domains (4) summary
    cd09413
    Location:227 → 284
    LIM1_Testin; The first LIM domain of Testin
    cd09416
    Location:290 → 345
    LIM2_Testin; The second LIM domain of Testin
    cd09419
    Location:352 → 410
    LIM3_Testin; The third LIM domain of Testin
    cd09829
    Location:100 → 186
    PET_testin; The PET domain of Testin

  2. XM_059885658.1 → XP_059741641.1  testin isoform X1

  3. XM_010804218.4 → XP_010802520.1  testin isoform X1

    See identical proteins and their annotated locations for XP_010802520.1

    Conserved Domains (4) summary
    cd09413
    Location:227 → 284
    LIM1_Testin; The first LIM domain of Testin
    cd09416
    Location:290 → 345
    LIM2_Testin; The second LIM domain of Testin
    cd09419
    Location:352 → 410
    LIM3_Testin; The third LIM domain of Testin
    cd09829
    Location:100 → 186
    PET_testin; The PET domain of Testin
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2YDE9.1 GenPept UniProtKB/Swiss-Prot:Q2YDE9

Gene LinkOut

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Molecular Biology Databases
Research Materials