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FBH1 F-box DNA helicase 1 [ Bos taurus (cattle) ]

Gene ID: 534383, updated on 5-Mar-2024

Summary

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Official Symbol
FBH1provided by VGNC
Official Full Name
F-box DNA helicase 1provided by VGNC
Primary source
VGNC:VGNC:28896
See related
Ensembl:ENSBTAG00000004147
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FBXO18
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (17565223..17604492, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene interleukin 2 receptor subunit alpha Neighboring gene interleukin 15 receptor subunit alpha Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC112449257 Neighboring gene ankyrin repeat domain-containing protein 7-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC157095

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box DNA helicase 1
Names
F-box only protein, helicase, 18
F-box protein, helicase, 18
NP_001092533.1
XP_010809398.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099063.1 → NP_001092533.1  F-box DNA helicase 1

    See identical proteins and their annotated locations for NP_001092533.1

    Status: PROVISIONAL

    Source sequence(s)
    BC142300
    UniProtKB/TrEMBL
    A5PJZ9, F1MSG2
    Related
    ENSBTAP00000005426.5, ENSBTAT00000005426.6
    Conserved Domains (4) summary
    COG0210
    Location:442 → 935
    UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
    pfam12937
    Location:213 → 262
    F-box-like; F-box-like
    pfam13538
    Location:873 → 934
    UvrD_C_2; UvrD-like helicase C-terminal domain
    cl21455
    Location:443 → 687
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    17565223..17604492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010811096.4 → XP_010809398.1  F-box DNA helicase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MXX2, F1MSG2
    Related
    ENSBTAP00000074463.2, ENSBTAT00000082535.2
    Conserved Domains (4) summary
    COG0210
    Location:464 → 957
    UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
    pfam12937
    Location:235 → 284
    F-box-like; F-box-like
    pfam13538
    Location:895 → 956
    UvrD_C_2; UvrD-like helicase C-terminal domain
    cl21455
    Location:465 → 709
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
Heading Accession and Version

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