ATP13A1 ATPase 13A1 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: ATP13A1provided by VGNC
Official Full Name: ATPase 13A1provided by VGNC
Primary source: VGNC:VGNC:26277
See related: BGD:BT24331; EnsemblRapid:ENSBTAG00070005568
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 26

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	7	NC_037334.1 (3672508..3688081)

Chromosome 7 - NC_037334.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed
enables ATPase-coupled monoatomic cation transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables P-type ion transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables membrane protein dislocase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in extraction of mislocalized protein from ER membrane	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intracellular calcium ion homeostasis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: endoplasmic reticulum transmembrane helix translocase

NP_001179738.1

EC 7.2.2.10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001192809.1 → NP_001179738.1 endoplasmic reticulum transmembrane helix translocase

See identical proteins and their annotated locations for NP_001179738.1

Status: PROVISIONAL

Source sequence(s)

NKLS02000007

UniProtKB/TrEMBL

F1MYA8

Related

ENSBTAP00070007287.1, ENSBTAT00070012768.1

Conserved Domains (4) summary

COG4087
Location:826 → 879

COG4087; Soluble P-type ATPase [General function prediction only]

TIGR01657
Location:82 → 1168

P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

pfam00122
Location:293 → 505

E1-E2_ATPase; E1-E2 ATPase

pfam12710
Location:638 → 868

HAD; haloacid dehalogenase-like hydrolase