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CHD7 chromodomain helicase DNA binding protein 7 [ Bos taurus (domestic cattle) ]

Gene ID: 533175, updated on 30-Jan-2025
Official Symbol
CHD7provided by VGNC
Official Full Name
chromodomain helicase DNA binding protein 7provided by VGNC
Primary source
VGNC:VGNC:27282
See related
BGD:BT15631; EnsemblRapid:ENSBTAG00070022938
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See CHD7 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (26298002..26488620)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449509 Neighboring gene RAB2A, member RAS oncogene family Neighboring gene uncharacterized LOC107133117 Neighboring gene uncharacterized LOC132342197 Neighboring gene uncharacterized LOC104974028

Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
chromodomain-helicase-DNA-binding protein 7
XP_024857592.1
XP_059730404.1
XP_059730405.1

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    26298002..26488620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025001824.2 → XP_024857592.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

    UniProtKB/TrEMBL
    E1BPM4
    Related
    ENSBTAP00070031049.1, ENSBTAT00070051701.1
    Conserved Domains (7) summary
    smart00592
    Location:2636 → 2680
    BRK; domain in transcription and CHROMO domain helicases
    cd00024
    Location:802 → 863
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    pfam00385
    Location:883 → 936
    Chromo; Chromo (CHRromatin Organisation MOdifier) domain
    pfam07533
    Location:2558 → 2598
    BRK; BRK domain
    pfam09606
    Location:28 → 435
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl26464
    Location:245 → 574
    Atrophin-1; Atrophin-1 family
    cl26465
    Location:968 → 1567
    SNF2_N; SNF2 family N-terminal domain

  2. XM_059874422.1 → XP_059730405.1  chromodomain-helicase-DNA-binding protein 7 isoform X2

  3. XM_059874421.1 → XP_059730404.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

    UniProtKB/TrEMBL
    E1BPM4
Nucleotide Protein Strain
Heading Accession and Version

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