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BBS4 Bardet-Biedl syndrome 4 [ Bos taurus (domestic cattle) ]

Gene ID: 532120, updated on 5-Sep-2025
Gene symbol
BBS4
Gene description
Bardet-Biedl syndrome 4
See related
BGD:BT26697; EnsemblRapid:ENSBTAG00070025685
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
all
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See BBS4 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (19486133..19532116)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346340 Neighboring gene transmembrane protein 202 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 1 Neighboring gene microRNA mir-12031 Neighboring gene ADP dependent glucokinase Neighboring gene uncharacterized LOC132346343

Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. The conserved Bardet-Biedl syndrome proteins assemble a coat that traffics membrane proteins to cilia. Jin H, et al. Cell, 2010 Jun 25. PMID 20603001, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Clone Names

  • MGC139427

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
BBSome complex member BBS4
Names
bardet-Biedl syndrome 4 protein homolog

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075956.1 → NP_001069424.1  BBSome complex member BBS4

    See identical proteins and their annotated locations for NP_001069424.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116137
    UniProtKB/Swiss-Prot
    Q1JQ97
    UniProtKB/TrEMBL
    A0AAA9TMX9
    Related
    ENSBTAP00070034723.1, ENSBTAT00070058346.1
    Conserved Domains (2) summary
    TIGR02917
    Location:69 → 433
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:101 → 129
    TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    19486133..19532116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997616.2 → XP_024853384.1  BBSome complex member BBS4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MLA1, A0AAA9TMX9
    Related
    ENSBTAP00070034713.1, ENSBTAT00070058329.1
    Conserved Domains (2) summary
    sd00006
    Location:89 → 117
    TPR; TPR repeat [structural motif]
    cl26002
    Location:57 → 421
    TPR_11; TPR repeat

  2. XM_010808954.4 → XP_010807256.1  BBSome complex member BBS4 isoform X1

    See identical proteins and their annotated locations for XP_010807256.1

    UniProtKB/TrEMBL
    A0A3Q1MLA1, A0AAA9TMX9
    Conserved Domains (2) summary
    sd00006
    Location:89 → 117
    TPR; TPR repeat [structural motif]
    cl26002
    Location:57 → 421
    TPR_11; TPR repeat

  3. XM_059890459.1 → XP_059746442.1  BBSome complex member BBS4 isoform X2

    Related
    ENSBTAP00070034702.1, ENSBTAT00070058308.1

  4. XM_059890460.1 → XP_059746443.1  BBSome complex member BBS4 isoform X3

  5. XM_059890458.1 → XP_059746441.1  BBSome complex member BBS4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MLA1, A0AAA9TMX9

  6. XM_010808957.4 → XP_010807259.1  BBSome complex member BBS4 isoform X3

    Conserved Domains (4) summary
    smart00028
    Location:2 → 29
    TPR; Tetratricopeptide repeats
    sd00006
    Location:98 → 126
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:100 → 163
    TPR_11; TPR repeat
    pfam13432
    Location:170 → 228
    TPR_16; Tetratricopeptide repeat
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1JQ97.1 GenPept UniProtKB/Swiss-Prot:Q1JQ97

Gene LinkOut

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