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LAMB3 laminin subunit beta 3 [ Bos taurus (cattle) ]

Gene ID: 529939, updated on 26-Nov-2016
Gene symbol
LAMB3
Gene description
laminin subunit beta 3
See related
BGD:BT22967; Ensembl:ENSBTAG00000016542
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
Location:
chromosome: 16
Exon count:
29
Annotation release Status Assembly Chr Location
105 current Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 16 AC_000173.1 (75562861..75610921)

Chromosome 16 - AC_000173.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104974526 Neighboring gene G0/G1 switch 2 Neighboring gene calcium/calmodulin dependent protein kinase IG Neighboring gene uncharacterized LOC104974529 Neighboring gene microRNA 205

Homology

Clone Names

  • MGC143240
Preferred Names
laminin subunit beta-3
Names
laminin, beta 3

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081596.1NP_001075065.1  laminin subunit beta-3 precursor

    See identical proteins and their annotated locations for NP_001075065.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133303
    UniProtKB/TrEMBL
    A2VDM1
    Related
    ENSBTAP00000022005, ENSBTAT00000022005
    Conserved Domains (6) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    pfam01442
    Location:8311009
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1.1 Primary Assembly

Genomic

  1. AC_000173.1 Reference Bos_taurus_UMD_3.1.1 Primary Assembly

    Range
    75562861..75610921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010813564.2XP_010811866.1  

    See identical proteins and their annotated locations for XP_010811866.1

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  2. XM_015475278.1XP_015330764.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  3. XM_005217367.3XP_005217424.1  

    See identical proteins and their annotated locations for XP_005217424.1

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  4. XM_015475281.1XP_015330767.1  

    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  5. XM_015475274.1XP_015330760.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  6. XM_010813565.2XP_010811867.1  

    See identical proteins and their annotated locations for XP_010811867.1

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  7. XM_015475276.1XP_015330762.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  8. XM_015475275.1XP_015330761.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  9. XM_015475279.1XP_015330765.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  10. XM_015475277.1XP_015330763.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)
  11. XM_015475280.1XP_015330766.1  

    UniProtKB/TrEMBL
    F1MMK1
    Conserved Domains (5) summary
    smart00180
    Location:534576
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:430479
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:379428
    Laminin_EGF; Laminin EGF domain
    cl02488
    Location:8941094
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02806
    Location:20248
    Laminin_N; Laminin N-terminal (Domain VI)

Alternate Btau_5.0.1

Genomic

  1. NC_007314.5 Alternate Btau_5.0.1

    Range
    75823472..75866816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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