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ESRRB estrogen related receptor beta [ Bos taurus (domestic cattle) ]

Gene ID: 528437, updated on 30-Jan-2025
Official Symbol
ESRRBprovided by VGNC
Official Full Name
estrogen related receptor betaprovided by VGNC
Primary source
VGNC:VGNC:28609
See related
BGD:BT16464; EnsemblRapid:ENSBTAG00070021761
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See ESRRB in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (87626899..87810135)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346420 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene G-patch domain containing 2 like Neighboring gene uncharacterized LOC132346422 Neighboring gene uncharacterized LOC112448526

Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Estrogen receptor beta (ERbeta) is expressed differently from ERalpha in bovine placentomes. Schuler G, et al. Exp Clin Endocrinol Diabetes, 2005 Feb. PMID 15772903
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear receptor-mediated steroid hormone signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
steroid hormone receptor ERR2

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    87626899..87810135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010809670.4 → XP_010807972.1  steroid hormone receptor ERR2 isoform X3

    UniProtKB/TrEMBL
    F1N0K9, Q2T9T6
    Related
    ENSBTAP00070029210.1, ENSBTAT00070048978.1
    Conserved Domains (2) summary
    cd06946
    Location:217 → 436
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:103 → 198
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_010809669.4 → XP_010807971.1  steroid hormone receptor ERR2 isoform X2

    See identical proteins and their annotated locations for XP_010807971.1

    UniProtKB/TrEMBL
    A0A3Q1M3W3, Q2T9T6
    Related
    ENSBTAP00070029202.1, ENSBTAT00070048960.1
    Conserved Domains (2) summary
    cd06946
    Location:233 → 452
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:119 → 214
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_059890946.1 → XP_059746929.1  steroid hormone receptor ERR2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q1NCU4, Q2T9T6

  4. XM_059890945.1 → XP_059746928.1  steroid hormone receptor ERR2 isoform X1

    UniProtKB/TrEMBL
    Q2T9T6
Nucleotide Protein Strain
Heading Accession and Version

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