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KLHDC8B kelch domain containing 8B [ Bos taurus (domestic cattle) ]

Gene ID: 527321, updated on 30-Jan-2025
Official Symbol
KLHDC8Bprovided by VGNC
Official Full Name
kelch domain containing 8Bprovided by VGNC
Primary source
VGNC:VGNC:30640
See related
BGD:BT27518; EnsemblRapid:ENSBTAG00070036287
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
all
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Try the new Transcripts and proteins table
See KLHDC8B in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (50843123..50863720, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene chromosome 22 C3orf62 homolog Neighboring gene interactor of HORMAD1 1 Neighboring gene chromosome 22 C3orf84 homolog Neighboring gene coiled-coil domain containing 71 Neighboring gene laminin subunit beta-2 Neighboring gene laminin subunit beta-2

Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Clone Names

  • MGC142469

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cytokinetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic nuclear division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear chromosome segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cellularization cleavage furrow IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intercellular bridge IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
kelch domain-containing protein 8B

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035370.2 → NP_001030447.2  kelch domain-containing protein 8B

    See identical proteins and their annotated locations for NP_001030447.2

    Status: PROVISIONAL

    Source sequence(s)
    BT020815
    UniProtKB/Swiss-Prot
    Q0V8C3, Q5E9V5
    Related
    ENSBTAP00070049327.1, ENSBTAT00070081327.1
    Conserved Domains (5) summary
    smart00612
    Location:176 → 222
    Kelch; Kelch domain
    PRK14131
    Location:1 → 288
    PRK14131; N-acetylneuraminic acid mutarotase; Provisional
    sd00038
    Location:69 → 113
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:68 → 114
    Kelch_1; Kelch motif
    pfam13964
    Location:271 → 319
    Kelch_6; Kelch motif

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    50843123..50863720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059879697.1 → XP_059735680.1  kelch domain-containing protein 8B isoform X2

  2. XM_015459584.3 → XP_015315070.1  kelch domain-containing protein 8B isoform X1

    Conserved Domains (2) summary
    sd00038
    Location:69 → 113
    Kelch; KELCH repeat [structural motif]
    cl28614
    Location:7 → 210
    BTB; Broad-Complex, Tramtrack and Bric a brac

RNA

  1. XR_009492279.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5E9V5.1 GenPept UniProtKB/Swiss-Prot:Q5E9V5

Gene LinkOut

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Molecular Biology Databases
Research Materials