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INO80D INO80 complex subunit D [ Bos taurus (domestic cattle) ]

Gene ID: 527199, updated on 30-Jan-2025
Official Symbol
INO80Dprovided by VGNC
Official Full Name
INO80 complex subunit Dprovided by VGNC
Primary source
VGNC:VGNC:30206
See related
BGD:BT27908; EnsemblRapid:ENSBTAG00070002038
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See INO80D in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (94352872..94423434, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene neuropilin 2 Neighboring gene uncharacterized LOC112443681 Neighboring gene uncharacterized LOC132343212 Neighboring gene translation initiation factor IF-2 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene NADH:ubiquinone oxidoreductase core subunit S1

Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
INO80 complex subunit D

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205940.2 → NP_001192869.2  INO80 complex subunit D

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000002
    UniProtKB/TrEMBL
    A0AAA9STU0, E1BBU9
    Related
    ENSBTAP00070002651.1, ENSBTAT00070004690.1
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    94352872..94423434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024975216.2 → XP_024830984.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  2. XM_010802256.4 → XP_010800558.1  INO80 complex subunit D isoform X1

    See identical proteins and their annotated locations for XP_010800558.1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  3. XM_024975222.2 → XP_024830990.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  4. XM_010802254.4 → XP_010800556.1  INO80 complex subunit D isoform X1

    See identical proteins and their annotated locations for XP_010800556.1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  5. XM_010802255.4 → XP_010800557.1  INO80 complex subunit D isoform X1

    See identical proteins and their annotated locations for XP_010800557.1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  6. XM_010802258.3 → XP_010800560.1  INO80 complex subunit D isoform X1

    See identical proteins and their annotated locations for XP_010800560.1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  7. XM_010802257.4 → XP_010800559.1  INO80 complex subunit D isoform X1

    See identical proteins and their annotated locations for XP_010800559.1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  8. XM_059874947.1 → XP_059730930.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M6Z2, A0AAA9STU0

  9. XM_024975230.2 → XP_024830998.1  INO80 complex subunit D isoform X2

    UniProtKB/TrEMBL
    A0AAA9STU0, E1BBU9
    Related
    ENSBTAP00070002647.1, ENSBTAT00070004682.1
    Conserved Domains (1) summary
    pfam13891
    Location:446 → 510
    zf-C3Hc3H; Potential DNA-binding domain

  10. XM_059874962.1 → XP_059730945.1  INO80 complex subunit D isoform X3

    UniProtKB/TrEMBL
    A0AAA9T514
Nucleotide Protein Strain
Heading Accession and Version

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