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CCDC77 coiled-coil domain containing 77 [ Bos taurus (cattle) ]

Gene ID: 527084, updated on 5-Mar-2024

Summary

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Official Symbol
CCDC77provided by VGNC
Official Full Name
coiled-coil domain containing 77provided by VGNC
Primary source
VGNC:VGNC:26915
See related
Ensembl:ENSBTAG00000000049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CCDC77 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (107294806..107321557)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 13 Neighboring gene lysine demethylase 5A Neighboring gene ribosomal protein L27a pseudogene Neighboring gene large ribosomal subunit protein uL16-like Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 3 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC104972574 Neighboring gene ninjurin 2 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC157228

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 77

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102106.1 → NP_001095576.1  coiled-coil domain-containing protein 77

    See identical proteins and their annotated locations for NP_001095576.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149505
    UniProtKB/TrEMBL
    A0A3Q1LZQ2, A6QPV2, F1MUN8
    Related
    ENSBTAP00000049060.2, ENSBTAT00000053510.3
    Conserved Domains (1) summary
    COG1196
    Location:60 → 300
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    107294806..107321557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005207264.5 → XP_005207321.1  coiled-coil domain-containing protein 77 isoform X1

    See identical proteins and their annotated locations for XP_005207321.1

    UniProtKB/TrEMBL
    A0A3Q1LNM9, A0A3Q1LZQ2
    Conserved Domains (1) summary
    pfam07888
    Location:50 → 313
    CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

  2. XM_005207266.5 → XP_005207323.1  coiled-coil domain-containing protein 77 isoform X1

    See identical proteins and their annotated locations for XP_005207323.1

    UniProtKB/TrEMBL
    A0A3Q1LNM9, A0A3Q1LZQ2
    Related
    ENSBTAP00000058436.2, ENSBTAT00000074643.2
    Conserved Domains (1) summary
    pfam07888
    Location:50 → 313
    CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

RNA

  1. XR_009494406.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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