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CASP7 caspase 7 [ Bos taurus (cattle) ]

Gene ID: 526279, updated on 5-Mar-2024

Summary

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Official Symbol
CASP7provided by VGNC
Official Full Name
caspase 7provided by VGNC
Primary source
VGNC:VGNC:26783
See related
Ensembl:ENSBTAG00000006615
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (34146851..34188250)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene transcription factor 7 like 2 Neighboring gene hyaluronan binding protein 2 Neighboring gene nebulin related anchoring protein Neighboring gene pleckstrin homology domain containing S1 Neighboring gene DNA cross-link repair 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Relationship between group II caspase activity of bovine preimplantation embryos and capacity for hatching. Jousan FD, et al. J Reprod Dev, 2008 Jun. PMID 18277054
  2. mRNA expression of Bcl-2, Bax, caspase-3 and -7 cannot be used as a marker for apoptosis in bovine blastocysts. Vandaele L, et al. Anim Reprod Sci, 2008 Jun. PMID 18272300
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. the capacity for blastocysts to undergo further development is related to degree of group II caspase activity
    Title: Relationship between group II caspase activity of bovine preimplantation embryos and capacity for hatching.
  2. mRNA expression of Bax, Bcl-2, caspase-3 and-7 cannot be used as a reliable apoptosis detection method.
    Title: mRNA expression of Bcl-2, Bax, caspase-3 and -7 cannot be used as a marker for apoptosis in bovine blastocysts.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase-7
Names
caspase 7, apoptosis-related cysteine peptidase
XP_002698555.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    34146851..34188250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002698509.6 → XP_002698555.1  caspase-7

    See identical proteins and their annotated locations for XP_002698555.1

    UniProtKB/TrEMBL
    F1MD58
    Related
    ENSBTAP00000089427.1, ENSBTAT00000106721.1
    Conserved Domains (1) summary
    cd00032
    Location:60 → 301
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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