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SDR16C6 short chain dehydrogenase/reductase family 16C, member 6 [ Bos taurus (cattle) ]

Gene ID: 525500, updated on 16-Aug-2020

Summary

Gene symbol
SDR16C6
Gene description
short chain dehydrogenase/reductase family 16C, member 6
See related
BGD:BT13183; Ensembl:ENSBTAG00000040321
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
RDHE2
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Genomic context

See SDR16C6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 14 NC_037341.1 (23475940..23502005, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 14 AC_000171.1 (25153581..25179651, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 7 Neighboring gene short chain dehydrogenase/reductase family 16C member 5 Neighboring gene proenkephalin Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

General gene information

Homology

  • Homologs of the SDR16C6 gene: The SDR16C6 gene is conserved in chimpanzee, Rhesus monkey, mouse, rat, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, and N.crassa.
  • Orthologs

General protein information

Preferred Names
short-chain dehydrogenase/reductase family 16C member 6
Names
epidermal retinal dehydrogenase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099707.1NP_001093177.1  short-chain dehydrogenase/reductase family 16C member 6

    See identical proteins and their annotated locations for NP_001093177.1

    Status: PROVISIONAL

    Source sequence(s)
    BC142138
    UniProtKB/Swiss-Prot
    A5PJJ7
    Related
    ENSBTAP00000048107.3, ENSBTAT00000052250.3
    Conserved Domains (2) summary
    cd05339
    Location:38281
    17beta-HSDXI-like_SDR_c; human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs
    pfam00106
    Location:37227
    adh_short; short chain dehydrogenase

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    23475940..23502005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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