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TBXT T-box transcription factor T [ Bos taurus (domestic cattle) ]

Gene ID: 524443, updated on 4-Oct-2024

Summary

Official Symbol
TBXTprovided by VGNC
Official Full Name
T-box transcription factor Tprovided by VGNC
Primary source
VGNC:VGNC:35552
See related
BGD:BT29815; Ensembl:ENSBTAG00000018681
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
T
Orthologs
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Genomic context

See TBXT in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (101150481..101160650, complement)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 10A Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132346147 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132346148

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General protein information

Preferred Names
T-box transcription factor T
Names
T brachyury transcription factor
T, brachyury homolog
brachyury protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192985.1NP_001179914.1  T-box transcription factor T

    See identical proteins and their annotated locations for NP_001179914.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000009
    Conserved Domains (1) summary
    cd00182
    Location:42223
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    101150481..101160650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059889714.1XP_059745697.1  T-box transcription factor T isoform X1

    UniProtKB/TrEMBL
    F1MR49
    Related
    ENSBTAP00000024865.6, ENSBTAT00000024865.7