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D5Ertd615e DNA segment, Chr 5, ERATO Doi 615, expressed [ Mus musculus (house mouse) ]

Gene ID: 52401, updated on 24-Sep-2025
Official Symbol
D5Ertd615eprovided by MGI
Official Full Name
DNA segment, Chr 5, ERATO Doi 615, expressedprovided by MGI
Primary source
MGI:MGI:1277236
See related
Ensembl:ENSMUSG00000029092 AllianceGenome:MGI:1277236
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930435H24Rik
Expression
Low expression observed in reference dataset See more
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See D5Ertd615e in Genome Data Viewer
Location:
5 B3; 5 24.5 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (45166513..45581742, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (45009171..45424400, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36076 Neighboring gene RIKEN cDNA 4930431F12 gene Neighboring gene predicted gene, 46912 Neighboring gene STARR-seq mESC enhancer starr_12993 Neighboring gene STARR-seq mESC enhancer starr_12994 Neighboring gene STARR-seq mESC enhancer starr_12995 Neighboring gene STARR-seq mESC enhancer starr_12996 Neighboring gene STARR-positive B cell enhancer ABC_E669 Neighboring gene quinoid dihydropteridine reductase Neighboring gene clarin 2

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Related articles in PubMed

  1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  2. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Markers

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131933.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK043596
    Related
    ENSMUST00000197016.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    45166513..45581742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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