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ELSPBP1 epididymal sperm binding protein 1 [ Bos taurus (cattle) ]

Gene ID: 522297, updated on 4-Jul-2020

Summary

Official Symbol
ELSPBP1provided by VGNC
Official Full Name
epididymal sperm binding protein 1provided by VGNC
Primary source
VGNC:VGNC:28460
See related
BGD:BT22735; Ensembl:ENSBTAG00000016113
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See ELSPBP1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 18 NC_037345.1 (54825102..54848797)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 18 AC_000175.1 (55278927..55290149)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene binder of sperm protein homolog 2-like Neighboring gene binder of sperm protein homolog 1 Neighboring gene calcium binding protein 5 Neighboring gene DNA ligase 1

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
epididymal sperm-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192558.1NP_001179487.1  epididymal sperm-binding protein 1 precursor

    See identical proteins and their annotated locations for NP_001179487.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000018
    UniProtKB/TrEMBL
    E1B9P4
    Related
    ENSBTAP00000021448.3, ENSBTAT00000021448.4
    Conserved Domains (2) summary
    cd00062
    Location:177223
    FN2; Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and ...
    pfam00040
    Location:2966
    fn2; Fibronectin type II domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    54825102..54848797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015458167.2XP_015313653.1  epididymal sperm-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    E1B9P4
    Conserved Domains (2) summary
    cd00062
    Location:177223
    FN2; Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and ...
    pfam00040
    Location:2966
    fn2; Fibronectin type II domain
  2. XM_024978289.1XP_024834057.1  epididymal sperm-binding protein 1 isoform X1

    Conserved Domains (2) summary
    cd00062
    Location:177223
    FN2; Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and ...
    pfam00040
    Location:2966
    fn2; Fibronectin type II domain
  3. XM_024978290.1XP_024834058.1  epididymal sperm-binding protein 1 isoform X1

    Conserved Domains (2) summary
    cd00062
    Location:177223
    FN2; Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and ...
    pfam00040
    Location:2966
    fn2; Fibronectin type II domain
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