SMNDC1 survival motor neuron domain containing 1 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: SMNDC1provided by VGNC
Official Full Name: survival motor neuron domain containing 1provided by VGNC
Primary source: VGNC:VGNC:35024
See related: BGD:BT20923; Ensembl:ENSBTAG00000000551
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: SPF30
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 26

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	26	NC_037353.1 (30879297..30890590, complement)

Chromosome 26 - NC_037353.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in mRNA processing	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of alternative mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of precatalytic spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: survival of motor neuron-related-splicing factor 30

Names: splicing factor 30, survival of motor neuron-related; survival motor neuron domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001035337.1 → NP_001030414.1 survival of motor neuron-related-splicing factor 30

See identical proteins and their annotated locations for NP_001030414.1

Status: PROVISIONAL

Source sequence(s)

BC102568

UniProtKB/Swiss-Prot

Q3T045

Related

ENSBTAP00000000722.3, ENSBTAT00000000722.4

Conserved Domains (1) summary

cd04508
Location:76 → 124

TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...