Format

Send to:

Choose Destination

FBXL5 F-box and leucine rich repeat protein 5 [ Bos taurus (cattle) ]

Gene ID: 519695, updated on 6-May-2021

Summary

Official Symbol
FBXL5provided by VGNC
Official Full Name
F-box and leucine rich repeat protein 5provided by VGNC
Primary source
VGNC:VGNC:28891
See related
BGD:BT21102; Ensembl:ENSBTAG00000021214
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See FBXL5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 6 NC_037333.1 (110760350..110819069, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 6 AC_000163.1 (115572954..115610206, complement)

Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene coiled-coil and C2 domain containing 2A Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene microRNA mir-2448 Neighboring gene uncharacterized LOC104968939 Neighboring gene uncharacterized LOC100849050

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC148944

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables iron ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in iron ion homeostasis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of cellular protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 
involved_in protein ubiquitination ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in perinuclear region of cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082440.1NP_001075909.1  F-box/LRR-repeat protein 5

    See identical proteins and their annotated locations for NP_001075909.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133613
    UniProtKB/Swiss-Prot
    A2VE78
    Related
    ENSBTAP00000028266.6, ENSBTAT00000028266.6
    Conserved Domains (4) summary
    cd09293
    Location:354408
    AMN1; Antagonist of mitotic exit network protein 1
    cd12109
    Location:7160
    Hr_FBXL5; Hemerythrin-like domain of FBXL5-like proteins
    sd00034
    Location:333357
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:205249
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037333.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    110760350..110819069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024993214.1XP_024848982.1  F-box/LRR-repeat protein 5 isoform X1

    Conserved Domains (4) summary
    cd12109
    Location:1105
    Hr_FBXL5; Hemerythrin-like domain of FBXL5-like proteins
    sd00034
    Location:278302
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:150194
    F-box-like; F-box-like
    cl28166
    Location:299353
    AMN1; Antagonist of mitotic exit network protein 1
Support Center