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RUBCNL rubicon like autophagy enhancer [ Bos taurus (domestic cattle) ]

Gene ID: 517231, updated on 5-Sep-2025
Official Symbol
RUBCNLprovided by VGNC
Official Full Name
rubicon like autophagy enhancerprovided by VGNC
Primary source
VGNC:VGNC:34213
See related
EnsemblRapid:ENSBTAG00070026093
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
KIAA0226L; C12H13orf18
Orthologs
all
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See RUBCNL in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (16369971..16410643, complement)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene lymphocyte cytosolic protein 1 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC112449177 Neighboring gene leucine rich repeat containing 63 Neighboring gene microRNA mir-2285o-1 Neighboring gene microRNA mir-2285av Neighboring gene leucine rich repeats and calponin homology domain containing 1

Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC165939

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome-endosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein associated with UVRAG as autophagy enhancer
Names
KIAA0226-like ortholog
RUN and cysteine rich domain containing beclin 1 interacting protein like
Uncharacterized protein C13orf18 homolog
pacer
protein RUBCNL-like
protein Rubicon-like
rubicon like autophagy regulator

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102041.2 → NP_001095511.1  protein associated with UVRAG as autophagy enhancer

    See identical proteins and their annotated locations for NP_001095511.1

    Status: PROVISIONAL

    Source sequence(s)
    BC151662
    UniProtKB/Swiss-Prot
    A7E316
    UniProtKB/TrEMBL
    A0A3Q1MCG9
    Related
    ENSBTAP00070035123.1, ENSBTAT00070059236.1
    Conserved Domains (1) summary
    pfam13901
    Location:452 → 647
    zf-RING_9; Putative zinc-RING and/or ribbon

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    16369971..16410643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059892037.1 → XP_059748020.1  protein associated with UVRAG as autophagy enhancer isoform X1

    UniProtKB/Swiss-Prot
    A7E316
    UniProtKB/TrEMBL
    A0A3Q1MCG9

  2. XM_059892038.1 → XP_059748021.1  protein associated with UVRAG as autophagy enhancer isoform X1

    UniProtKB/Swiss-Prot
    A7E316
    UniProtKB/TrEMBL
    A0A3Q1MCG9

  3. XM_024999864.2 → XP_024855632.1  protein associated with UVRAG as autophagy enhancer isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MCG9
    Conserved Domains (1) summary
    pfam13901
    Location:452 → 543
    zf-RING_9; Putative zinc-RING and/or ribbon

  4. XM_059892036.1 → XP_059748019.1  protein associated with UVRAG as autophagy enhancer isoform X1

    UniProtKB/Swiss-Prot
    A7E316
    UniProtKB/TrEMBL
    A0A3Q1MCG9

  5. XM_059892039.1 → XP_059748022.1  protein associated with UVRAG as autophagy enhancer isoform X1

    UniProtKB/Swiss-Prot
    A7E316
    UniProtKB/TrEMBL
    A0A3Q1MCG9
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7E316.1 GenPept UniProtKB/Swiss-Prot:A7E316

Gene LinkOut

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