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ATP9A ATPase phospholipid transporting 9A (putative) [ Bos taurus (cattle) ]

Gene ID: 516579, updated on 24-Jun-2020

Summary

Gene symbol
ATP9A
Gene description
ATPase phospholipid transporting 9A (putative)
See related
Ensembl:ENSBTAG00000007962
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See ATP9A in Genome Data Viewer
Location:
chromosome: 13
Exon count:
31
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 13 NC_037340.1 (79433689..79557537, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 13 AC_000170.1 (80163432..80277868, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449352 Neighboring gene nuclear factor of activated T cells 2 Neighboring gene spalt like transcription factor 4 Neighboring gene ZFP64 zinc finger protein

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
probable phospholipid-transporting ATPase IIA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    79433689..79557537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025001332.1XP_024857100.1  probable phospholipid-transporting ATPase IIA isoform X2

    Conserved Domains (2) summary
    cd07541
    Location:47958
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:456564
    Cation_ATPase; Cation transport ATPase (P-type)
  2. XM_025001334.1XP_024857102.1  probable phospholipid-transporting ATPase IIA isoform X4

    Conserved Domains (2) summary
    cl21460
    Location:47907
    HAD_like; Haloacid Dehalogenase-like Hydrolases
    cl26237
    Location:457565
    Cation_ATPase; Cation transport ATPase (P-type)
  3. XM_005215069.4XP_005215126.1  probable phospholipid-transporting ATPase IIA isoform X1

    Conserved Domains (6) summary
    cd01427
    Location:644794
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01652
    Location:451037
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:101285
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:491565
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:3296
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:8031031
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
  4. XM_025001333.1XP_024857101.1  probable phospholipid-transporting ATPase IIA isoform X3

    Related
    ENSBTAP00000058116.1, ENSBTAT00000073955.1
    Conserved Domains (2) summary
    cd07541
    Location:55967
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:465573
    Cation_ATPase; Cation transport ATPase (P-type)
  5. XM_025001335.1XP_024857103.1  probable phospholipid-transporting ATPase IIA isoform X6

    Conserved Domains (2) summary
    cd07541
    Location:1870
    P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
    cl26237
    Location:368476
    Cation_ATPase; Cation transport ATPase (P-type)
  6. XM_005215070.4XP_005215127.1  probable phospholipid-transporting ATPase IIA isoform X5

    Related
    ENSBTAP00000010474.6, ENSBTAT00000010474.6
    Conserved Domains (6) summary
    cd01427
    Location:630780
    HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
    TIGR01652
    Location:311023
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:87271
    E1-E2_ATPase; E1-E2 ATPase
    pfam13246
    Location:477551
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16209
    Location:1882
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:7891017
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
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