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STRBP spermatid perinuclear RNA binding protein [ Bos taurus (domestic cattle) ]

Gene ID: 516282, updated on 5-Sep-2025
Official Symbol
STRBPprovided by VGNC
Official Full Name
spermatid perinuclear RNA binding proteinprovided by VGNC
Primary source
VGNC:VGNC:35421
See related
BGD:BT18280; EnsemblRapid:ENSBTAG00070019368
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See STRBP in Genome Data Viewer
Location:
chromosome: 11
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (94248311..94447010, complement)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene ribosomal protein L21 pseudogene Neighboring gene uncharacterized LOC107132958 Neighboring gene G protein-coupled receptor 21 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132346632 Neighboring gene DENN domain containing 1A Neighboring gene crumbs cell polarity complex component 2

Genomic Sequence:
NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC139542

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
spermatid perinuclear RNA-binding protein

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075739.1 → NP_001069207.1  spermatid perinuclear RNA-binding protein

    See identical proteins and their annotated locations for NP_001069207.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123453
    UniProtKB/Swiss-Prot
    Q08E27
    UniProtKB/TrEMBL
    A0AAA9TLN3
    Related
    ENSBTAP00070026370.1, ENSBTAT00070043853.1
    Conserved Domains (4) summary
    smart00572
    Location:81 → 334
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    pfam17228
    Location:608 → 667
    SGP; Sulphur globule protein
    cd19909
    Location:384 → 467
    DSRM_STRBP_rpt1; first double-stranded RNA binding motif of spermatid perinuclear RNA-binding protein (STRBP) and similar proteins
    cd19911
    Location:512 → 575
    DSRM_STRBP_rpt2; second double-stranded RNA binding motif of spermatid perinuclear RNA-binding protein (STRBP) and similar proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    94248311..94447010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059891235.1 → XP_059747218.1  spermatid perinuclear RNA-binding protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9TLN3, A0AAF7AND0

  2. XM_059891236.1 → XP_059747219.1  spermatid perinuclear RNA-binding protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9TLN3, A0AAF7AND0

  3. XM_024998627.2 → XP_024854395.1  spermatid perinuclear RNA-binding protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9TLN3, A0AAF7AND0
    Related
    ENSBTAP00070026423.1, ENSBTAT00070043922.1
    Conserved Domains (2) summary
    smart00572
    Location:81 → 334
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:389 → 452
    DSRM; Double-stranded RNA binding motif

  4. XM_024998629.2 → XP_024854397.1  spermatid perinuclear RNA-binding protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9TLN3, A0AAF7AND0
    Conserved Domains (2) summary
    smart00572
    Location:81 → 334
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:389 → 452
    DSRM; Double-stranded RNA binding motif

  5. XM_059891237.1 → XP_059747220.1  spermatid perinuclear RNA-binding protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9TLN3, A0AAF7AND0

  6. XM_005213131.4 → XP_005213188.1  spermatid perinuclear RNA-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MTB9, A0AAA9TLN3
    Related
    ENSBTAP00070026380.1, ENSBTAT00070043868.1
    Conserved Domains (3) summary
    smart00572
    Location:81 → 334
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19909
    Location:384 → 467
    DSRM_STRBP_rpt1; first double-stranded RNA binding motif of spermatid perinuclear RNA-binding protein (STRBP) and similar proteins
    cd19911
    Location:512 → 575
    DSRM_STRBP_rpt2; second double-stranded RNA binding motif of spermatid perinuclear RNA-binding protein (STRBP) and similar proteins

  7. XM_059891238.1 → XP_059747221.1  spermatid perinuclear RNA-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A3Q1ME31, A0AAF6ZA63
    Related
    ENSBTAP00070026356.1, ENSBTAT00070043826.1

RNA

  1. XR_236501.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08E27.1 GenPept UniProtKB/Swiss-Prot:Q08E27

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