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PCCB propionyl-CoA carboxylase subunit beta [ Bos taurus (domestic cattle) ]

Gene ID: 515902, updated on 18-Aug-2024

Summary

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Official Symbol
PCCBprovided by VGNC
Official Full Name
propionyl-CoA carboxylase subunit betaprovided by VGNC
Primary source
VGNC:VGNC:32614
See related
BGD:BT17833; Ensembl:ENSBTAG00000015221
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (132929061..133024300, complement)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene stromal antigen 1 Neighboring gene prefoldin subunit 4-like Neighboring gene uncharacterized LOC132345898 Neighboring gene protein phosphatase 2 regulatory subunit B''alpha Neighboring gene MSL complex subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In situ hybridization of five loci to cattle chromosome 1. Schmutz SM, et al. Cytogenet Cell Genet, 1998. PMID 9691175
  2. The small GTPase RAB28 is required for phagocytosis of cone outer segments by the murine retinal pigmented epithelium. Ying G, et al. J Biol Chem, 2018 Nov 9. PMID 30228185, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC134255

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase beta chain, mitochondrial
Names
PCCase beta subunit
PCCase subunit beta
propanoyl-CoA:carbon dioxide ligase beta subunit
propanoyl-CoA:carbon dioxide ligase subunit beta
propionyl CoA carboxylase, beta polypeptide
propionyl Coenzyme A carboxylase, beta polypeptide
propionyl-CoA carboxylase beta subunit
NP_001033637.1
XP_024843198.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038548.2 → NP_001033637.1  propionyl-CoA carboxylase beta chain, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001033637.1

    Status: PROVISIONAL

    Source sequence(s)
    BC109784
    UniProtKB/Swiss-Prot
    Q2TBR0
    UniProtKB/TrEMBL
    A0A452DIR0
    Related
    ENSBTAP00000067251.2, ENSBTAT00000073617.2
    Conserved Domains (2) summary
    COG4799
    Location:37 → 539
    MmdA; Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism]
    cl23717
    Location:63 → 210
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    132929061..133024300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024987430.2 → XP_024843198.1  propionyl-CoA carboxylase beta chain, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MAQ6
    Conserved Domains (1) summary
    pfam01039
    Location:1 → 454
    Carboxyl_trans; Carboxyl transferase domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2TBR0.1 GenPept UniProtKB/Swiss-Prot:Q2TBR0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials