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OSER1 oxidative stress responsive serine rich 1 [ Homo sapiens (human) ]

Gene ID: 51526, updated on 1-Jun-2020

Summary

Official Symbol
OSER1provided by HGNC
Official Full Name
oxidative stress responsive serine rich 1provided by HGNC
Primary source
HGNC:HGNC:16105
See related
Ensembl:ENSG00000132823
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Osr1; Perit1; HSPC207; C20orf111; dJ1183I21.1
Expression
Broad expression in testis (RPKM 25.7), bone marrow (RPKM 22.5) and 24 other tissues See more
Orthologs

Genomic context

See OSER1 in Genome Data Viewer
Location:
20q13.12
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (44195939..44217229, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (42824579..42839702, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 7745 Neighboring gene junctophilin 2 Neighboring gene JPH2 intron CAGE-defined T cell enhancer Neighboring gene OSER1 divergent transcript Neighboring gene Sharpr-MPRA regulatory region 13448 Neighboring gene ganglioside induced differentiation associated protein 1 like 1 Neighboring gene fat storage inducing transmembrane protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cellular response to hydrogen peroxide IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
oxidative stress-responsive serine-rich protein 1
Names
oxidative stress-responsive 1
oxidative stress-responsive protein 1
peroxide-inducible transcript 1 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016470.8NP_057554.4  oxidative stress-responsive serine-rich protein 1

    See identical proteins and their annotated locations for NP_057554.4

    Status: VALIDATED

    Source sequence(s)
    AL035447, BC064973, BF109349, BI462161
    Consensus CDS
    CCDS13327.1
    UniProtKB/Swiss-Prot
    Q9NX31
    Related
    ENSP00000255174.2, ENST00000255174.3
    Conserved Domains (1) summary
    pfam05604
    Location:1175
    DUF776; Protein of unknown function (DUF776)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    44195939..44217229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017027873.1XP_016883362.1  oxidative stress-responsive serine-rich protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q9NX31
    Conserved Domains (1) summary
    pfam05604
    Location:1175
    DUF776; Protein of unknown function (DUF776)
  2. XM_011528854.3XP_011527156.1  oxidative stress-responsive serine-rich protein 1 isoform X2

    Conserved Domains (1) summary
    pfam05604
    Location:1137
    DUF776; Protein of unknown function (DUF776)
  3. XM_024451891.1XP_024307659.1  oxidative stress-responsive serine-rich protein 1 isoform X1

    Conserved Domains (1) summary
    pfam05604
    Location:1175
    DUF776; Protein of unknown function (DUF776)
  4. XM_011528853.3XP_011527155.1  oxidative stress-responsive serine-rich protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011527155.1

    UniProtKB/Swiss-Prot
    Q9NX31
    Related
    ENSP00000362061.1, ENST00000372970.6
    Conserved Domains (1) summary
    pfam05604
    Location:1175
    DUF776; Protein of unknown function (DUF776)
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