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IFNGR2 interferon gamma receptor 2 [ Bos taurus (domestic cattle) ]

Gene ID: 514889, updated on 30-Jan-2025
Official Symbol
IFNGR2provided by VGNC
Official Full Name
interferon gamma receptor 2provided by VGNC
Primary source
VGNC:VGNC:30059
See related
BGD:BT27196; EnsemblRapid:ENSBTAG00070003155
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See IFNGR2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (2098171..2129613, complement)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 50B Neighboring gene small nucleolar RNA SNORA20 Neighboring gene uncharacterized LOC132346179 Neighboring gene uncharacterized LOC132346184 Neighboring gene interferon alpha and beta receptor subunit 1 Neighboring gene uncharacterized LOC104970778

Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Identification of SNPs in interferon gamma, interleukin-22, and their receptors and associations with health and production-related traits in Canadian Holstein bulls. Verschoor CP, et al. Anim Biotechnol, 2011 Jan. PMID 21328101
  2. Bovine IFNGR2, IL12RB1, IL12RB2, and IL23R polymorphisms and MAP infection status. Pant SD, et al. Mamm Genome, 2011 Oct. PMID 21597988
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Four SNPs in IFNGR2, IL12RB1, IL12RB2, and IL23R were found to be associated with the MAP infection status of the resource population.
    Title: Bovine IFNGR2, IL12RB1, IL12RB2, and IL23R polymorphisms and MAP infection status.
  2. SNPs in IFNG, IFNGR1 and R2, IL22, and IL22RA1 were analyzed for an association to Estimated breeding values for somatic cell score in Canadian Holstein bulls; no significant associations were found.
    Title: Identification of SNPs in interferon gamma, interleukin-22, and their receptors and associations with health and production-related traits in Canadian Holstein bulls.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
interferon gamma receptor 2
Names
interferon gamma receptor 2 (interferon gamma transducer 1)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    2098171..2129613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005201116.4 → XP_005201173.1  interferon gamma receptor 2 isoform X1

    See identical proteins and their annotated locations for XP_005201173.1

    UniProtKB/TrEMBL
    A0A3Q1LLQ7
    Related
    ENSBTAP00070004279.1, ENSBTAT00070007251.1
    Conserved Domains (2) summary
    pfam01108
    Location:30 → 129
    Tissue_fac; Tissue factor
    cl21522
    Location:141 → 239
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_024993617.2 → XP_024849385.1  interferon gamma receptor 2 isoform X2

    UniProtKB/TrEMBL
    Q05FF0
    Conserved Domains (2) summary
    pfam01108
    Location:30 → 129
    Tissue_fac; Tissue factor
    cl21522
    Location:141 → 239
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein Strain
Heading Accession and Version

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