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PEX5 peroxisomal biogenesis factor 5 [ Bos taurus (cattle) ]

Gene ID: 514832, updated on 4-Apr-2024

Summary

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Official Symbol
PEX5provided by VGNC
Official Full Name
peroxisomal biogenesis factor 5provided by VGNC
Primary source
VGNC:VGNC:32761
See related
BGD:BT20895; Ensembl:ENSBTAG00000010490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (103177657..103195040, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene antigen WC1.1-like Neighboring gene transmembrane emp24 domain-containing protein 7-like Neighboring gene TP53-regulated inhibitor of apoptosis 1-like Neighboring gene calsyntenin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC138089

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peroxisome matrix targeting signal-1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into peroxisome matrix, docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal biogenesis factor 5
Names
PTS1 receptor
PTS1-BP
PTS1R
peroxin-5
peroxisomal C-terminal targeting signal import receptor
peroxisomal targeting signal 1 receptor
peroxisome receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046183.1 → NP_001039648.1  peroxisomal biogenesis factor 5

    See identical proteins and their annotated locations for NP_001039648.1

    Status: PROVISIONAL

    Source sequence(s)
    BC114692
    UniProtKB/Swiss-Prot
    A1L572, Q1RMV0
    Related
    ENSBTAP00000013864.4, ENSBTAT00000013864.6
    Conserved Domains (2) summary
    TIGR02917
    Location:347 → 584
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:489 → 517
    TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    103177657..103195040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024991695.2 → XP_024847463.1  peroxisomal biogenesis factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LSG4
    Related
    ENSBTAP00000052543.3, ENSBTAT00000052144.4
    Conserved Domains (2) summary
    sd00006
    Location:452 → 480
    TPR; TPR repeat [structural motif]
    cl26002
    Location:310 → 547
    TPR_11; TPR repeat

  2. XM_015471306.3 → XP_015326792.1  peroxisomal biogenesis factor 5 isoform X4

    Conserved Domains (3) summary
    sd00006
    Location:444 → 472
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:444 → 477
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:443 → 509
    TPR_11; TPR repeat

  3. XM_010805583.4 → XP_010803885.1  peroxisomal biogenesis factor 5 isoform X3

    See identical proteins and their annotated locations for XP_010803885.1

    UniProtKB/TrEMBL
    A0A3Q1LSG4
    Conserved Domains (2) summary
    sd00006
    Location:452 → 480
    TPR; TPR repeat [structural motif]
    cl26002
    Location:310 → 547
    TPR_11; TPR repeat

  4. XM_015471305.3 → XP_015326791.1  peroxisomal biogenesis factor 5 isoform X2

    Conserved Domains (3) summary
    sd00006
    Location:481 → 509
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:481 → 514
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:480 → 546
    TPR_11; TPR repeat

  5. XM_005207137.5 → XP_005207194.1  peroxisomal biogenesis factor 5 isoform X1

    See identical proteins and their annotated locations for XP_005207194.1

    UniProtKB/Swiss-Prot
    A1L572, Q1RMV0
    Conserved Domains (2) summary
    TIGR02917
    Location:347 → 584
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:489 → 517
    TPR; TPR repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1RMV0.1 GenPept UniProtKB/Swiss-Prot:Q1RMV0

Gene LinkOut

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