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CD22 CD22 molecule [ Bos taurus (domestic cattle) ]

Gene ID: 514582, updated on 30-Jan-2025
Official Symbol
CD22provided by VGNC
Official Full Name
CD22 moleculeprovided by VGNC
Primary source
VGNC:VGNC:27012
See related
EnsemblRapid:ENSBTAG00070015823
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See CD22 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (46035956..46049449)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene hepcidin antimicrobial peptide Neighboring gene myelin associated glycoprotein Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene free fatty acid receptor 1 Neighboring gene free fatty acid receptor 3

Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CD4 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of B cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
B-cell receptor CD22

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    46035956..46049449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059877497.1 → XP_059733480.1  B-cell receptor CD22 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NI55
    Related
    ENSBTAP00070020962.1, ENSBTAT00070035654.1

  2. XM_059877498.1 → XP_059733481.1  B-cell receptor CD22 isoform X3

  3. XM_059877499.1 → XP_059733482.1  B-cell receptor CD22 isoform X5

  4. XM_015458110.3 → XP_015313596.2  B-cell receptor CD22 isoform X2

    UniProtKB/TrEMBL
    F1MFW5
    Related
    ENSBTAP00070020978.1, ENSBTAT00070035677.1
    Conserved Domains (5) summary
    smart00409
    Location:641 → 712
    IG; Immunoglobulin
    pfam13895
    Location:461 → 537
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:373 → 437
    Ig_3; Immunoglobulin domain
    cl11960
    Location:185 → 262
    Ig; Immunoglobulin domain
    cl28434
    Location:283 → 364
    I-set; Immunoglobulin I-set domain

  5. XM_024978680.2 → XP_024834448.1  B-cell receptor CD22 isoform X4

    Related
    ENSBTAP00070020965.1, ENSBTAT00070035659.1
    Conserved Domains (5) summary
    smart00409
    Location:600 → 671
    IG; Immunoglobulin
    pfam13895
    Location:420 → 496
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:332 → 396
    Ig_3; Immunoglobulin domain
    cl11960
    Location:144 → 221
    Ig; Immunoglobulin domain
    cl28434
    Location:242 → 323
    I-set; Immunoglobulin I-set domain
Nucleotide Protein Strain
Heading Accession and Version

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