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MCOLN3 mucolipin 3 [ Bos taurus (cattle) ]

Gene ID: 514345, updated on 27-Aug-2018

Summary

Official Symbol
MCOLN3provided by VGNC
Official Full Name
mucolipin 3provided by VGNC
Primary source
VGNC:VGNC:31320
See related
BGD:BT25625; Ensembl:ENSBTAG00000016982
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs

Genomic context

See MCOLN3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 3 NC_037330.1 (59055412..59090528)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 3 AC_000160.1 (59246215..59281255)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene WD repeat domain 63 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene mucolipin 2 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene lysophosphatidic acid receptor 3

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192367.1NP_001179296.1  mucolipin-3

    See identical proteins and their annotated locations for NP_001179296.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000003
    UniProtKB/TrEMBL
    E1BDG0
    Related
    ENSBTAP00000022589.5, ENSBTAT00000022589.5
    Conserved Domains (1) summary
    pfam08016
    Location:375508
    PKD_channel; Polycystin cation channel

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    59055412..59090528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005204381.4XP_005204438.1  mucolipin-3 isoform X2

    See identical proteins and their annotated locations for XP_005204438.1

    UniProtKB/TrEMBL
    E1BDG0
    Conserved Domains (1) summary
    pfam08016
    Location:375508
    PKD_channel; Polycystin cation channel
  2. XM_024988484.1XP_024844252.1  mucolipin-3 isoform X4

    Conserved Domains (1) summary
    cl27887
    Location:345478
    PKD_channel; Polycystin cation channel
  3. XM_010803375.3XP_010801677.1  mucolipin-3 isoform X3

    Conserved Domains (1) summary
    pfam08016
    Location:391500
    PKD_channel; Polycystin cation channel
  4. XM_010803373.3XP_010801675.1  mucolipin-3 isoform X1

    Conserved Domains (1) summary
    pfam08016
    Location:401534
    PKD_channel; Polycystin cation channel
  5. XM_010803374.3XP_010801676.1  mucolipin-3 isoform X2

    See identical proteins and their annotated locations for XP_010801676.1

    UniProtKB/TrEMBL
    E1BDG0
    Conserved Domains (1) summary
    pfam08016
    Location:375508
    PKD_channel; Polycystin cation channel
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