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RAB42 RAB42, member RAS oncogene family [ Bos taurus (cattle) ]

Gene ID: 514286, updated on 5-Mar-2024

Summary

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Gene symbol
RAB42
Gene description
RAB42, member RAS oncogene family
See related
BGD:BT25297; Ensembl:ENSBTAG00000021525
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
RAB42P; RAB42P1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (124840408..124843315, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene U11 spliceosomal RNA Neighboring gene TATA-box binding protein associated factor 12 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene small nucleolar RNA SNORA44 Neighboring gene small nucleolar RNA host gene 12 (non-protein coding)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative Ras-related protein Rab-42; ras-related protein Rab-42
Names
RAB42, member RAS oncogene family, pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    124840408..124843315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002685683.6 → XP_002685729.1  ras-related protein Rab-42

    See identical proteins and their annotated locations for XP_002685729.1

    UniProtKB/TrEMBL
    F1MX39
    Related
    ENSBTAP00000028686.5, ENSBTAT00000028686.7
    Conserved Domains (1) summary
    cl21455
    Location:8 → 198
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
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