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ACSL5 acyl-CoA synthetase long chain family member 5 [ Bos taurus (domestic cattle) ]

Gene ID: 514159, updated on 30-Jan-2025
Official Symbol
ACSL5provided by VGNC
Official Full Name
acyl-CoA synthetase long chain family member 5provided by VGNC
Primary source
VGNC:VGNC:25567
See related
BGD:BT24027; EnsemblRapid:ENSBTAG00070023134
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See ACSL5 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (32906427..32957884)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 2G-like Neighboring gene tectorin beta Neighboring gene microRNA mir-6715 Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 Neighboring gene vesicle transport through interaction with t-SNAREs 1A

Genomic Sequence:
NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Clone Names

  • MGC138948

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
long-chain-fatty-acid--CoA ligase 5
NP_001069118.1
XP_005225793.1
XP_005225794.1
XP_005225795.1
XP_005225796.1
XP_010818336.1
XP_024841364.1
XP_059737822.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075650.1 → NP_001069118.1  long-chain-fatty-acid--CoA ligase 5

    See identical proteins and their annotated locations for NP_001069118.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116023
    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6
    Related
    ENSBTAP00070031328.1, ENSBTAT00070052180.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    32906427..32957884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005225737.5 → XP_005225794.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_005225794.1

    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6
    Related
    ENSBTAP00070031300.1, ENSBTAT00070052129.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_005225739.5 → XP_005225796.1  long-chain-fatty-acid--CoA ligase 5 isoform X2

    UniProtKB/TrEMBL
    A0AAA9S064, A0AAA9U1A1
    Related
    ENSBTAP00070031291.1, ENSBTAT00070052112.1
    Conserved Domains (2) summary
    PLN02736
    Location:25 → 632
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:55 → 632
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_005225736.3 → XP_005225793.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_005225793.1

    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6
    Related
    ENSBTAP00070031286.1, ENSBTAT00070052102.1
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_024985596.2 → XP_024841364.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_059881839.1 → XP_059737822.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6

  6. XM_010820034.3 → XP_010818336.1  long-chain-fatty-acid--CoA ligase 5 isoform X3

    UniProtKB/TrEMBL
    A0AAA9U1A1, F6QL54
    Related
    ENSBTAP00070031318.1, ENSBTAT00070052162.1
    Conserved Domains (2) summary
    PLN02736
    Location:20 → 627
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:50 → 627
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  7. XM_005225738.5 → XP_005225795.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_005225795.1

    UniProtKB/TrEMBL
    A0AAA9U1A1, Q1LZF6
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein Strain
Heading Accession and Version

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