U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATF6B activating transcription factor 6 beta [ Bos taurus (domestic cattle) ]

Gene ID: 513928, updated on 5-Sep-2025
Official Symbol
ATF6Bprovided by VGNC
Official Full Name
activating transcription factor 6 betaprovided by VGNC
Primary source
VGNC:VGNC:26245
See related
BGD:BT10447; EnsemblRapid:ENSBTAG00070012733
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CREBL1
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See ATF6B in Genome Data Viewer
Location:
chromosome: 23
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27254943..27264835)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132343671 Neighboring gene uncharacterized LOC101903877 Neighboring gene FKBP prolyl isomerase like Neighboring gene uncharacterized LOC132343672 Neighboring gene tenascin XB Neighboring gene cytochrome P450 family 21 subfamily A member 2 Neighboring gene complement C4

Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. YAC/BAC contig spanning the MHC class III region of cattle. Gelhaus A, et al. Cytogenet Genome Res, 2006. PMID 16974083
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cyclic AMP-dependent transcription factor ATF-6 beta
Names
cAMP responsive element binding protein-like 1

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083683.1 → NP_001077152.1  cyclic AMP-dependent transcription factor ATF-6 beta

    See identical proteins and their annotated locations for NP_001077152.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123436
    UniProtKB/TrEMBL
    A0AAA9S0Y6, A4FUY2
    Conserved Domains (1) summary
    cd14700
    Location:325 → 376
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27254943..27264835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015459879.3 → XP_015315365.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X1

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Conserved Domains (1) summary
    cd14700
    Location:341 → 392
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

  2. XM_005223629.5 → XP_005223686.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X5

    UniProtKB/TrEMBL
    A0AAA9S0Y6, F6Q115
    Related
    ENSBTAP00070017622.1, ENSBTAT00070028895.1
    Conserved Domains (1) summary
    cd14700
    Location:341 → 392
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

  3. XM_015459880.3 → XP_015315366.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X2

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Conserved Domains (1) summary
    cd14700
    Location:336 → 387
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

  4. XM_024983570.2 → XP_024839338.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X6

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Conserved Domains (2) summary
    cd14700
    Location:336 → 387
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
    pfam14362
    Location:317 → 422
    DUF4407; Domain of unknown function (DUF4407)

  5. XM_015459881.3 → XP_015315367.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X3

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Conserved Domains (1) summary
    cd14700
    Location:330 → 381
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

  6. XM_024983571.2 → XP_024839339.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X7

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Related
    ENSBTAP00070017645.1, ENSBTAT00070028935.1
    Conserved Domains (2) summary
    cd14700
    Location:330 → 381
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
    pfam14362
    Location:311 → 416
    DUF4407; Domain of unknown function (DUF4407)

  7. XM_015459882.3 → XP_015315368.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X4

    UniProtKB/TrEMBL
    A0AAA9S0Y6
    Conserved Domains (1) summary
    cd14700
    Location:325 → 376
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

  8. XM_059880311.1 → XP_059736294.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X8

  9. XM_059880312.1 → XP_059736295.1  cyclic AMP-dependent transcription factor ATF-6 beta isoform X9

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous