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FANCE FA complementation group E [ Bos taurus (domestic cattle) ]

Gene ID: 513464, updated on 30-Jan-2025
Official Symbol
FANCEprovided by VGNC
Official Full Name
FA complementation group Eprovided by VGNC
Primary source
VGNC:VGNC:28856
See related
BGD:BT30250; EnsemblRapid:ENSBTAG00070009956
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Location:
chromosome: 23
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (9415933..9425061)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene DEF6 guanine nucleotide exchange factor Neighboring gene peroxisome proliferator activated receptor delta Neighboring gene ribosomal protein L10a Neighboring gene TEA domain transcription factor 3

Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
Fanconi anemia group E protein
Names
Fanconi anemia complementation group E

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192349.2 → NP_001179278.2  Fanconi anemia group E protein

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000023
    UniProtKB/TrEMBL
    A0AAA9S9M3, F1N3Y8
    Related
    ENSBTAP00070013163.1, ENSBTAT00070022350.1
    Conserved Domains (2) summary
    cl12008
    Location:278 → 538
    FANCE_c-term; Fanconi anemia complementation group E protein, C-terminal domain
    pfam10243
    Location:173 → 242
    MIP-T3; Microtubule-binding protein MIP-T3

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    9415933..9425061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005223325.5 → XP_005223382.1  Fanconi anemia group E protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MJJ3, A0AAA9S9M3
    Related
    ENSBTAP00070013169.1, ENSBTAT00070022358.1
    Conserved Domains (1) summary
    cl12008
    Location:278 → 515
    FANCE_c-term; Fanconi anemia complementation group E protein, C-terminal domain

  2. XM_059880306.1 → XP_059736289.1  Fanconi anemia group E protein isoform X2

    UniProtKB/TrEMBL
    A0AAA9S9M3, A0AAA9TPZ9
    Related
    ENSBTAP00070013149.1, ENSBTAT00070022327.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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