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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001288998.2 → NP_001275927.1 GEM-interacting protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site and lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1.
- Source sequence(s)
-
AK297220, BC126436, BI912857, CD366767
- UniProtKB/Swiss-Prot
-
Q9P107
- UniProtKB/TrEMBL
-
B4DLZ1
- Conserved Domains (5) summary
-
- TIGR02473
Location:83 → 213
- flagell_FliJ; flagellar export protein FliJ
- smart00109
Location:463 → 508
- C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
- cd04378
Location:520 → 723
- RhoGAP_GMIP_PARG1; RhoGAP_GMIP_PARG1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of GMIP (Gem interacting protein) and PARG1 (PTPL1-associated RhoGAP1). GMIP plays important roles in neurite growth and axonal guidance, and interacts with Gem, ...
- pfam13863
Location:172 → 225
- DUF4200; Domain of unknown function (DUF4200)
- cl12013
Location:93 → 164
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
NM_001288999.2 → NP_001275928.1 GEM-interacting protein isoform 3
See identical proteins and their annotated locations for NP_001275928.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (3) is shorter, compared to isoform 1.
- Source sequence(s)
-
AK297220, BC144142, BI912857, CD366767
- Consensus CDS
-
CCDS74318.1
- UniProtKB/Swiss-Prot
-
Q9P107
- UniProtKB/TrEMBL
-
B4DLZ1
- Related
- ENSP00000467054.1, ENST00000587238.5
- Conserved Domains (5) summary
-
- TIGR02473
Location:83 → 213
- flagell_FliJ; flagellar export protein FliJ
- smart00109
Location:466 → 511
- C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
- cd04378
Location:523 → 726
- RhoGAP_GMIP_PARG1; RhoGAP_GMIP_PARG1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of GMIP (Gem interacting protein) and PARG1 (PTPL1-associated RhoGAP1). GMIP plays important roles in neurite growth and axonal guidance, and interacts with Gem, ...
- pfam13863
Location:172 → 225
- DUF4200; Domain of unknown function (DUF4200)
- cl12013
Location:93 → 164
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
NM_016573.4 → NP_057657.2 GEM-interacting protein isoform 1
See identical proteins and their annotated locations for NP_057657.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AK297220, BC126436, BI912857, CD366767
- Consensus CDS
-
CCDS12408.1
- UniProtKB/Swiss-Prot
- B7ZLZ0, Q9P107
- UniProtKB/TrEMBL
- A0A024R7N1, B4DLZ1
- Related
- ENSP00000203556.3, ENST00000203556.9
- Conserved Domains (4) summary
-
- smart00109
Location:492 → 537
- C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
- cd04378
Location:549 → 752
- RhoGAP_GMIP_PARG1; RhoGAP_GMIP_PARG1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of GMIP (Gem interacting protein) and PARG1 (PTPL1-associated RhoGAP1). GMIP plays important roles in neurite growth and axonal guidance, and interacts with Gem, ...
- cl12013
Location:93 → 164
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
- cl28111
Location:760 → 874
- Marek_A; Marek's disease glycoprotein A
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
19629476..19643657 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005259927.3 → XP_005259984.1 GEM-interacting protein isoform X1
- Conserved Domains (5) summary
-
- TIGR02473
Location:83 → 213
- flagell_FliJ; flagellar export protein FliJ
- smart00109
Location:489 → 534
- C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
- cd04378
Location:546 → 749
- RhoGAP_GMIP_PARG1; RhoGAP_GMIP_PARG1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of GMIP (Gem interacting protein) and PARG1 (PTPL1-associated RhoGAP1). GMIP plays important roles in neurite growth and axonal guidance, and interacts with Gem, ...
- pfam13863
Location:172 → 225
- DUF4200; Domain of unknown function (DUF4200)
- cl12013
Location:93 → 164
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_017026862.2 → XP_016882351.1 GEM-interacting protein isoform X2
-
XM_047438906.1 → XP_047294862.1 GEM-interacting protein isoform X5
-
XM_047438905.1 → XP_047294861.1 GEM-interacting protein isoform X4
-
XM_047438904.1 → XP_047294860.1 GEM-interacting protein isoform X3
-
XM_047438907.1 → XP_047294863.1 GEM-interacting protein isoform X6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
19766986..19781167 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)