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RAD52 RAD52 homolog, DNA repair protein [ Bos taurus (domestic cattle) ]

Gene ID: 512897, updated on 30-Jan-2025
Official Symbol
RAD52provided by VGNC
Official Full Name
RAD52 homolog, DNA repair proteinprovided by VGNC
Primary source
VGNC:VGNC:33688
See related
BGD:BT14205; EnsemblRapid:ENSBTAG00070028671
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See RAD52 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (107708711..107734431, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446768 Neighboring gene microRNA mir-2437 Neighboring gene WNK lysine deficient protein kinase 1 Neighboring gene uncharacterized LOC112446769 Neighboring gene ELKS/RAB6-interacting/CAST family member 1 Neighboring gene Wnt family member 5B Neighboring gene F-box and leucine rich repeat protein 14

Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA recombinase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via single-strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
DNA repair protein RAD52 homolog

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024525.1 → NP_001019696.1  DNA repair protein RAD52 homolog

    See identical proteins and their annotated locations for NP_001019696.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021822
    UniProtKB/TrEMBL
    A0AAA9S6C3, Q58CX5
    Related
    ENSBTAP00070039309.1, ENSBTAT00070065191.1
    Conserved Domains (1) summary
    TIGR00607
    Location:37 → 198
    rad52; recombination protein rad52

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    107708711..107734431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005207239.5 → XP_005207296.1  DNA repair protein RAD52 homolog isoform X4

    UniProtKB/TrEMBL
    A0AAA9S6C3
    Conserved Domains (1) summary
    cl01936
    Location:37 → 115
    Rad52_Rad22; Rad52/22 family double-strand break repair protein

  2. XM_005207234.5 → XP_005207291.1  DNA repair protein RAD52 homolog isoform X2

    See identical proteins and their annotated locations for XP_005207291.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, A2VE43
    Conserved Domains (1) summary
    TIGR00607
    Location:37 → 198
    rad52; recombination protein rad52

  3. XM_010805644.4 → XP_010803946.1  DNA repair protein RAD52 homolog isoform X3

    UniProtKB/TrEMBL
    A0AAA9S6C3
    Conserved Domains (1) summary
    cl01936
    Location:37 → 131
    Rad52_Rad22; Rad52/22 family double-strand break repair protein

  4. XM_010805640.4 → XP_010803942.1  DNA repair protein RAD52 homolog isoform X1

    See identical proteins and their annotated locations for XP_010803942.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, F6QFR0
    Related
    ENSBTAP00070039337.1, ENSBTAT00070065222.1
    Conserved Domains (1) summary
    cl01936
    Location:37 → 214
    Rad52_Rad22; Rad52/22 family double-strand break repair protein

  5. XM_010805643.4 → XP_010803945.1  DNA repair protein RAD52 homolog isoform X2

    See identical proteins and their annotated locations for XP_010803945.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, A2VE43
    Conserved Domains (1) summary
    TIGR00607
    Location:37 → 198
    rad52; recombination protein rad52

  6. XM_010805641.4 → XP_010803943.1  DNA repair protein RAD52 homolog isoform X1

    See identical proteins and their annotated locations for XP_010803943.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, F6QFR0
    Conserved Domains (1) summary
    cl01936
    Location:37 → 214
    Rad52_Rad22; Rad52/22 family double-strand break repair protein

  7. XM_059886321.1 → XP_059742304.1  DNA repair protein RAD52 homolog isoform X1

    UniProtKB/TrEMBL
    A0AAA9S6C3, F6QFR0

  8. XM_005207236.5 → XP_005207293.1  DNA repair protein RAD52 homolog isoform X2

    See identical proteins and their annotated locations for XP_005207293.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, A2VE43
    Conserved Domains (1) summary
    TIGR00607
    Location:37 → 198
    rad52; recombination protein rad52

  9. XM_010805642.4 → XP_010803944.1  DNA repair protein RAD52 homolog isoform X1

    See identical proteins and their annotated locations for XP_010803944.1

    UniProtKB/TrEMBL
    A0AAA9S6C3, F6QFR0
    Conserved Domains (1) summary
    cl01936
    Location:37 → 214
    Rad52_Rad22; Rad52/22 family double-strand break repair protein
Nucleotide Protein Strain
Heading Accession and Version

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