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MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 51275, updated on 23-Nov-2021

Summary

Official Symbol
MAPKAPK5-AS1provided by HGNC
Official Full Name
MAPKAPK5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:24091
See related
Ensembl:ENSG00000234608
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C12orf47
Expression
Ubiquitous expression in colon (RPKM 6.8), lymph node (RPKM 5.9) and 25 other tissues See more
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Genomic context

See MAPKAPK5-AS1 in Genome Data Viewer
Location:
12q24.12
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (111839767..111843005, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (112277571..112280809, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family member 10 Neighboring gene aldehyde dehydrogenase 2 family member Neighboring gene microRNA 6761 Neighboring gene MAPK activated protein kinase 5 Neighboring gene ribosomal protein S2 pseudogene 41 Neighboring gene transmembrane protein 116 Neighboring gene ADAM metallopeptidase domain 1A (pseudogene)

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • MAPKAPK5 antisense RNA 1 (non-protein coding)
  • apoptosis-related protein PNAS-1

Clone Names

  • FLJ39616, AC003029.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015404.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003029, AK096935, BC071748, JQ794500
    Related
    ENST00000428207.4
  2. NR_152605.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003029, BC107695
  3. NR_152606.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003029, BC032560, BC107695
  4. NR_152607.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003029, BC007973, BC107695
    Related
    ENST00000442119.6
  5. NR_152608.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC003029, BC071748, BC107695
    Related
    ENST00000443596.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    111839767..111843005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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