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JADE2 jade family PHD finger 2 [ Bos taurus (domestic cattle) ]

Gene ID: 512319, updated on 30-Jan-2025
Official Symbol
JADE2provided by VGNC
Official Full Name
jade family PHD finger 2provided by VGNC
Primary source
VGNC:VGNC:30359
See related
BGD:BT19605; EnsemblRapid:ENSBTAG00070007644
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
PHF15
Orthologs
human mouse all
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See JADE2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (46066372..46118399)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene CDKN2A interacting protein N-terminal like Neighboring gene uncharacterized LOC112447421 Neighboring gene uncharacterized LOC112447420 Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene secretion associated Ras related GTPase 1B

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
E3 ubiquitin-protein ligase Jade-2
Names
PHD finger protein 15

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    46066372..46118399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024995167.2 → XP_024850935.2  E3 ubiquitin-protein ligase Jade-2 isoform X3

    UniProtKB/TrEMBL
    A0AAA9SND0

  2. XM_024995168.2 → XP_024850936.2  E3 ubiquitin-protein ligase Jade-2 isoform X1

    UniProtKB/TrEMBL
    E1BK85

  3. XM_024995165.2 → XP_024850933.2  E3 ubiquitin-protein ligase Jade-2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LKF6

  4. XM_059888889.1 → XP_059744872.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    UniProtKB/TrEMBL
    E1BK85

  5. XM_059888891.1 → XP_059744874.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    UniProtKB/TrEMBL
    E1BK85

  6. XM_005209397.5 → XP_005209454.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    See identical proteins and their annotated locations for XP_005209454.1

    UniProtKB/TrEMBL
    E1BK85
    Conserved Domains (3) summary
    cd15705
    Location:252 → 362
    ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
    cl26518
    Location:135 → 504
    EPL1; Enhancer of polycomb-like
    cl28033
    Location:599 → 771
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  7. XM_059888890.1 → XP_059744873.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    UniProtKB/TrEMBL
    E1BK85

  8. XM_005209395.5 → XP_005209452.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    See identical proteins and their annotated locations for XP_005209452.1

    UniProtKB/TrEMBL
    E1BK85
    Related
    ENSBTAP00070010014.1, ENSBTAT00070017248.1
    Conserved Domains (3) summary
    cd15705
    Location:252 → 362
    ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
    cl26518
    Location:135 → 504
    EPL1; Enhancer of polycomb-like
    cl28033
    Location:599 → 771
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  9. XM_059888892.1 → XP_059744875.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    UniProtKB/TrEMBL
    E1BK85

  10. XM_005209394.5 → XP_005209451.2  E3 ubiquitin-protein ligase Jade-2 isoform X4

    UniProtKB/TrEMBL
    E1BK85
    Related
    ENSBTAP00070010022.1, ENSBTAT00070017261.1

  11. XM_005209396.5 → XP_005209453.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

    See identical proteins and their annotated locations for XP_005209453.1

    UniProtKB/TrEMBL
    E1BK85
    Conserved Domains (3) summary
    cd15705
    Location:252 → 362
    ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
    cl26518
    Location:135 → 504
    EPL1; Enhancer of polycomb-like
    cl28033
    Location:599 → 771
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein Strain
Heading Accession and Version

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