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ZNF652 zinc finger protein 652 [ Bos taurus (domestic cattle) ]

Gene ID: 511703, updated on 30-Jan-2025
Official Symbol
ZNF652provided by VGNC
Official Full Name
zinc finger protein 652provided by VGNC
Primary source
VGNC:VGNC:37322
See related
BGD:BT14487; EnsemblRapid:ENSBTAG00070019041
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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See ZNF652 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (37239583..37307728)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene nerve growth factor receptor Neighboring gene prohibitin 1 Neighboring gene uncharacterized LOC112442651 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1

Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
zinc finger protein 652

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193118.1 → NP_001180047.1  zinc finger protein 652

    See identical proteins and their annotated locations for NP_001180047.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000019
    UniProtKB/TrEMBL
    F1N440
    Conserved Domains (3) summary
    COG5048
    Location:441 → 490
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:389 → 409
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:457 → 480
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    37239583..37307728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059877932.1 → XP_059733915.1  zinc finger protein 652 isoform X1

    UniProtKB/TrEMBL
    F1N440

  2. XM_005220554.5 → XP_005220611.1  zinc finger protein 652 isoform X1

    See identical proteins and their annotated locations for XP_005220611.1

    UniProtKB/TrEMBL
    F1N440
    Related
    ENSBTAP00070025718.1, ENSBTAT00070042978.1
    Conserved Domains (3) summary
    COG5048
    Location:441 → 490
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:389 → 409
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:457 → 480
    zf-H2C2_2; Zinc-finger double domain

  3. XM_010816131.4 → XP_010814433.1  zinc finger protein 652 isoform X1

    See identical proteins and their annotated locations for XP_010814433.1

    UniProtKB/TrEMBL
    F1N440
    Conserved Domains (3) summary
    COG5048
    Location:441 → 490
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:389 → 409
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:457 → 480
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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